Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC4.35□□□□□ -1.71
Col6a4A2AX52 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC4.35□□□□□ -1.71
Col6a4A2AX52 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Col6a4A2AX52 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col6a4A2AX52 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col6a4A2AX52 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
Col6a4A2AX52 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col6a4A2AX52 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.35□□□□□ -1.71
Col6a4A2AX52 Gm44242-201ENSMUST00000204212 2721 ntBASIC4.35□□□□□ -1.71
Col6a4A2AX52 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Col6a4A2AX52 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Col6a4A2AX52 Gm20789-201ENSMUST00000221002 4195 ntBASIC4.35□□□□□ -1.71
Col6a4A2AX52 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col6a4A2AX52 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Col6a4A2AX52 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC4.35□□□□□ -1.71
Col6a4A2AX52 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col6a4A2AX52 Gm43333-201ENSMUST00000198340 2262 ntBASIC4.35□□□□□ -1.71
Col6a4A2AX52 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col6a4A2AX52 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC4.35□□□□□ -1.71
Col6a4A2AX52 Gm13452-201ENSMUST00000120896 1097 ntBASIC4.35□□□□□ -1.71
Col6a4A2AX52 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Col6a4A2AX52 Gm20519-201ENSMUST00000173684 359 ntBASIC4.35□□□□□ -1.71
Col6a4A2AX52 Gm20673-201ENSMUST00000177167 430 ntBASIC4.35□□□□□ -1.71
Col6a4A2AX52 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col6a4A2AX52 Gm5252-201ENSMUST00000189030 909 ntBASIC4.35□□□□□ -1.71
Col6a4A2AX52 Gm10048-201ENSMUST00000194196 372 ntBASIC4.35□□□□□ -1.71
Col6a4A2AX52 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC4.35□□□□□ -1.71
Col6a4A2AX52 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC4.35□□□□□ -1.71
Col6a4A2AX52 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC4.35□□□□□ -1.71
Col6a4A2AX52 Gm44074-201ENSMUST00000204562 337 ntBASIC4.35□□□□□ -1.71
Col6a4A2AX52 Gm44757-201ENSMUST00000206373 157 ntBASIC4.35□□□□□ -1.71
Col6a4A2AX52 Olfr881-201ENSMUST00000074611 948 ntBASIC4.35□□□□□ -1.71
Col6a4A2AX52 Gm42989-201ENSMUST00000200646 2306 ntBASIC4.35□□□□□ -1.71
Col6a4A2AX52 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Col6a4A2AX52 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Col6a4A2AX52 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC4.35□□□□□ -1.71
Col6a4A2AX52 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Col6a4A2AX52 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Col6a4A2AX52 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Col6a4A2AX52 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col6a4A2AX52 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Col6a4A2AX52 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col6a4A2AX52 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Col6a4A2AX52 Gm16007-201ENSMUST00000117837 286 ntBASIC4.34□□□□□ -1.71
Col6a4A2AX52 Gm13808-201ENSMUST00000121353 184 ntBASIC4.34□□□□□ -1.71
Col6a4A2AX52 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Col6a4A2AX52 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Col6a4A2AX52 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Col6a4A2AX52 Gm27193-201ENSMUST00000184217 586 ntBASIC4.34□□□□□ -1.71
Col6a4A2AX52 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC4.34□□□□□ -1.71
Col6a4A2AX52 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC4.34□□□□□ -1.71
Col6a4A2AX52 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC4.34□□□□□ -1.71
Col6a4A2AX52 Ighv10-4-201ENSMUST00000193702 299 ntBASIC4.34□□□□□ -1.71
Col6a4A2AX52 Gm42459-201ENSMUST00000199679 742 ntBASIC4.34□□□□□ -1.71
Col6a4A2AX52 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col6a4A2AX52 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col6a4A2AX52 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Col6a4A2AX52 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Col6a4A2AX52 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC4.34□□□□□ -1.71
Col6a4A2AX52 Gm37400-201ENSMUST00000193148 3605 ntBASIC4.34□□□□□ -1.71
Col6a4A2AX52 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.34□□□□□ -1.71
Col6a4A2AX52 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col6a4A2AX52 Gm14324-201ENSMUST00000121358 3051 ntBASIC4.34□□□□□ -1.71
Col6a4A2AX52 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Col6a4A2AX52 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col6a4A2AX52 Gm23193-201ENSMUST00000102427 82 ntBASIC4.34□□□□□ -1.72
Col6a4A2AX52 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
Col6a4A2AX52 Gm15206-201ENSMUST00000119143 454 ntBASIC4.34□□□□□ -1.72
Col6a4A2AX52 Gm12850-201ENSMUST00000119210 436 ntBASIC4.34□□□□□ -1.72
Col6a4A2AX52 Gm15791-201ENSMUST00000120365 319 ntBASIC4.34□□□□□ -1.72
Col6a4A2AX52 Gm11584-201ENSMUST00000120636 325 ntBASIC4.34□□□□□ -1.72
Col6a4A2AX52 Gm12807-201ENSMUST00000121546 962 ntBASIC4.34□□□□□ -1.72
Col6a4A2AX52 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Col6a4A2AX52 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC4.34□□□□□ -1.72
Col6a4A2AX52 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC4.34□□□□□ -1.72
Col6a4A2AX52 Gm33626-201ENSMUST00000206790 828 ntBASIC4.34□□□□□ -1.72
Col6a4A2AX52 Gm6906-201ENSMUST00000218014 569 ntBASIC4.34□□□□□ -1.72
Col6a4A2AX52 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
Col6a4A2AX52 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC4.34□□□□□ -1.72
Col6a4A2AX52 Gm44248-201ENSMUST00000203079 1549 ntBASIC4.34□□□□□ -1.72
Col6a4A2AX52 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
Col6a4A2AX52 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.72
Col6a4A2AX52 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Col6a4A2AX52 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
Col6a4A2AX52 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Col6a4A2AX52 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a4A2AX52 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a4A2AX52 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a4A2AX52 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC4.33□□□□□ -1.72
Col6a4A2AX52 Gm42598-201ENSMUST00000200110 2437 ntBASIC4.33□□□□□ -1.72
Col6a4A2AX52 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col6a4A2AX52 Gm44801-201ENSMUST00000207644 2060 ntBASIC4.33□□□□□ -1.72
Col6a4A2AX52 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Col6a4A2AX52 Gm19035-201ENSMUST00000193299 1742 ntBASIC4.33□□□□□ -1.72
Col6a4A2AX52 Gm18163-201ENSMUST00000197877 1643 ntBASIC4.33□□□□□ -1.72
Col6a4A2AX52 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col6a4A2AX52 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.33□□□□□ -1.72
Col6a4A2AX52 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.33□□□□□ -1.72
Col6a4A2AX52 Gm13367-201ENSMUST00000119955 796 ntBASIC4.33□□□□□ -1.72
Col6a4A2AX52 Gm14908-201ENSMUST00000120930 1286 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms