Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ube3bQ9ES34 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ube3bQ9ES34 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.15■□□□□ 0.98
Ube3bQ9ES34 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ube3bQ9ES34 Gm9694-201ENSMUST00000193347 1189 ntBASIC21.15■□□□□ 0.98
Ube3bQ9ES34 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.15■□□□□ 0.98
Ube3bQ9ES34 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ube3bQ9ES34 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ube3bQ9ES34 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ube3bQ9ES34 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ube3bQ9ES34 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ube3bQ9ES34 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ube3bQ9ES34 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ube3bQ9ES34 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ube3bQ9ES34 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ube3bQ9ES34 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ube3bQ9ES34 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ube3bQ9ES34 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ube3bQ9ES34 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ube3bQ9ES34 Gm12085-201ENSMUST00000119263 940 ntBASIC21.14■□□□□ 0.97
Ube3bQ9ES34 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC21.14■□□□□ 0.97
Ube3bQ9ES34 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ube3bQ9ES34 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ube3bQ9ES34 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ube3bQ9ES34 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ube3bQ9ES34 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ube3bQ9ES34 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ube3bQ9ES34 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ube3bQ9ES34 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Ube3bQ9ES34 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Ube3bQ9ES34 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ube3bQ9ES34 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ube3bQ9ES34 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ube3bQ9ES34 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ube3bQ9ES34 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC21.13■□□□□ 0.97
Ube3bQ9ES34 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ube3bQ9ES34 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.13■□□□□ 0.97
Ube3bQ9ES34 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.13■□□□□ 0.97
Ube3bQ9ES34 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ube3bQ9ES34 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Ube3bQ9ES34 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ube3bQ9ES34 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.13■□□□□ 0.97
Ube3bQ9ES34 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.13■□□□□ 0.97
Ube3bQ9ES34 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ube3bQ9ES34 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ube3bQ9ES34 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Ube3bQ9ES34 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ube3bQ9ES34 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ube3bQ9ES34 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.12■□□□□ 0.97
Ube3bQ9ES34 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ube3bQ9ES34 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Ube3bQ9ES34 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ube3bQ9ES34 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ube3bQ9ES34 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ube3bQ9ES34 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
Ube3bQ9ES34 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ube3bQ9ES34 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ube3bQ9ES34 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ube3bQ9ES34 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ube3bQ9ES34 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.11■□□□□ 0.97
Ube3bQ9ES34 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ube3bQ9ES34 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Ube3bQ9ES34 Mir7071-201ENSMUST00000184847 69 ntBASIC21.11■□□□□ 0.97
Ube3bQ9ES34 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.11■□□□□ 0.97
Ube3bQ9ES34 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ube3bQ9ES34 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ube3bQ9ES34 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ube3bQ9ES34 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ube3bQ9ES34 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ube3bQ9ES34 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ube3bQ9ES34 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Ube3bQ9ES34 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube3bQ9ES34 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube3bQ9ES34 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube3bQ9ES34 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube3bQ9ES34 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ube3bQ9ES34 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube3bQ9ES34 Gm38027-201ENSMUST00000192315 235 ntBASIC21.1■□□□□ 0.97
Ube3bQ9ES34 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC21.1■□□□□ 0.97
Ube3bQ9ES34 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ube3bQ9ES34 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.1■□□□□ 0.97
Ube3bQ9ES34 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube3bQ9ES34 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ube3bQ9ES34 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Ube3bQ9ES34 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube3bQ9ES34 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ube3bQ9ES34 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
Ube3bQ9ES34 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ube3bQ9ES34 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ube3bQ9ES34 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ube3bQ9ES34 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ube3bQ9ES34 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ube3bQ9ES34 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.09■□□□□ 0.97
Ube3bQ9ES34 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ube3bQ9ES34 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC21.09■□□□□ 0.97
Ube3bQ9ES34 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Ube3bQ9ES34 Gm30025-201ENSMUST00000218555 728 ntBASIC21.09■□□□□ 0.97
Ube3bQ9ES34 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ube3bQ9ES34 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ube3bQ9ES34 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms