Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.36■□□□□ 0.85
Col4a3bpQ9EQG9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a3bpQ9EQG9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a3bpQ9EQG9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a3bpQ9EQG9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a3bpQ9EQG9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a3bpQ9EQG9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.35■□□□□ 0.85
Col4a3bpQ9EQG9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.35■□□□□ 0.85
Col4a3bpQ9EQG9 Gm20049-201ENSMUST00000219950 730 ntBASIC20.35■□□□□ 0.85
Col4a3bpQ9EQG9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a3bpQ9EQG9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Col4a3bpQ9EQG9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.35■□□□□ 0.85
Col4a3bpQ9EQG9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a3bpQ9EQG9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a3bpQ9EQG9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a3bpQ9EQG9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a3bpQ9EQG9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a3bpQ9EQG9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a3bpQ9EQG9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a3bpQ9EQG9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Col4a3bpQ9EQG9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a3bpQ9EQG9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.34■□□□□ 0.85
Col4a3bpQ9EQG9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Col4a3bpQ9EQG9 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.34■□□□□ 0.85
Col4a3bpQ9EQG9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Col4a3bpQ9EQG9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a3bpQ9EQG9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a3bpQ9EQG9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a3bpQ9EQG9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a3bpQ9EQG9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a3bpQ9EQG9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a3bpQ9EQG9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Col4a3bpQ9EQG9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a3bpQ9EQG9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Col4a3bpQ9EQG9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a3bpQ9EQG9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a3bpQ9EQG9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col4a3bpQ9EQG9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col4a3bpQ9EQG9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.33■□□□□ 0.85
Col4a3bpQ9EQG9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.33■□□□□ 0.85
Col4a3bpQ9EQG9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Col4a3bpQ9EQG9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col4a3bpQ9EQG9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col4a3bpQ9EQG9 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.33■□□□□ 0.84
Col4a3bpQ9EQG9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col4a3bpQ9EQG9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a3bpQ9EQG9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a3bpQ9EQG9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a3bpQ9EQG9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a3bpQ9EQG9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a3bpQ9EQG9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Col4a3bpQ9EQG9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.32■□□□□ 0.84
Col4a3bpQ9EQG9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a3bpQ9EQG9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a3bpQ9EQG9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.32■□□□□ 0.84
Col4a3bpQ9EQG9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a3bpQ9EQG9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a3bpQ9EQG9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a3bpQ9EQG9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a3bpQ9EQG9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a3bpQ9EQG9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.31■□□□□ 0.84
Col4a3bpQ9EQG9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a3bpQ9EQG9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a3bpQ9EQG9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
Col4a3bpQ9EQG9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a3bpQ9EQG9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a3bpQ9EQG9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a3bpQ9EQG9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a3bpQ9EQG9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a3bpQ9EQG9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Col4a3bpQ9EQG9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a3bpQ9EQG9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Col4a3bpQ9EQG9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Col4a3bpQ9EQG9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a3bpQ9EQG9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a3bpQ9EQG9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col4a3bpQ9EQG9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col4a3bpQ9EQG9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col4a3bpQ9EQG9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col4a3bpQ9EQG9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Col4a3bpQ9EQG9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col4a3bpQ9EQG9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Col4a3bpQ9EQG9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col4a3bpQ9EQG9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Col4a3bpQ9EQG9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.29■□□□□ 0.84
Col4a3bpQ9EQG9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col4a3bpQ9EQG9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col4a3bpQ9EQG9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Col4a3bpQ9EQG9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col4a3bpQ9EQG9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col4a3bpQ9EQG9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col4a3bpQ9EQG9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Col4a3bpQ9EQG9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col4a3bpQ9EQG9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Col4a3bpQ9EQG9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Col4a3bpQ9EQG9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col4a3bpQ9EQG9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.28■□□□□ 0.84
Col4a3bpQ9EQG9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col4a3bpQ9EQG9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.28■□□□□ 0.84
Col4a3bpQ9EQG9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms