Protein–RNA interactions for Protein: Q9DA73

Ccdc89, Coiled-coil domain-containing protein 89, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc89Q9DA73 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc89Q9DA73 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Ccdc89Q9DA73 Gm12933-201ENSMUST00000120203 872 ntBASIC19.45■□□□□ 0.7
Ccdc89Q9DA73 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Ccdc89Q9DA73 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.45■□□□□ 0.7
Ccdc89Q9DA73 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc89Q9DA73 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.45■□□□□ 0.7
Ccdc89Q9DA73 Gm38285-201ENSMUST00000192928 922 ntBASIC19.45■□□□□ 0.7
Ccdc89Q9DA73 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc89Q9DA73 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc89Q9DA73 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc89Q9DA73 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc89Q9DA73 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ccdc89Q9DA73 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc89Q9DA73 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc89Q9DA73 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.45■□□□□ 0.7
Ccdc89Q9DA73 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc89Q9DA73 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc89Q9DA73 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc89Q9DA73 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc89Q9DA73 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc89Q9DA73 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.44■□□□□ 0.7
Ccdc89Q9DA73 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.44■□□□□ 0.7
Ccdc89Q9DA73 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ccdc89Q9DA73 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ccdc89Q9DA73 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc89Q9DA73 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc89Q9DA73 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc89Q9DA73 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.44■□□□□ 0.7
Ccdc89Q9DA73 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc89Q9DA73 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc89Q9DA73 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc89Q9DA73 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc89Q9DA73 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc89Q9DA73 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.43■□□□□ 0.7
Ccdc89Q9DA73 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.43■□□□□ 0.7
Ccdc89Q9DA73 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc89Q9DA73 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc89Q9DA73 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc89Q9DA73 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc89Q9DA73 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccdc89Q9DA73 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc89Q9DA73 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc89Q9DA73 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc89Q9DA73 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc89Q9DA73 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc89Q9DA73 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc89Q9DA73 Idnk-204ENSMUST00000226010 1898 ntBASIC19.42■□□□□ 0.7
Ccdc89Q9DA73 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc89Q9DA73 Gm5408-201ENSMUST00000197998 747 ntBASIC19.42■□□□□ 0.7
Ccdc89Q9DA73 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ccdc89Q9DA73 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc89Q9DA73 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc89Q9DA73 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc89Q9DA73 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc89Q9DA73 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc89Q9DA73 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.42■□□□□ 0.7
Ccdc89Q9DA73 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc89Q9DA73 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc89Q9DA73 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc89Q9DA73 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc89Q9DA73 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc89Q9DA73 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc89Q9DA73 Flg-201ENSMUST00000050758 1488 ntBASIC19.41■□□□□ 0.7
Ccdc89Q9DA73 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc89Q9DA73 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc89Q9DA73 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc89Q9DA73 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc89Q9DA73 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.41■□□□□ 0.7
Ccdc89Q9DA73 Zfp783-201ENSMUST00000095946 670 ntBASIC19.41■□□□□ 0.7
Ccdc89Q9DA73 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc89Q9DA73 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc89Q9DA73 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc89Q9DA73 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.41■□□□□ 0.7
Ccdc89Q9DA73 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc89Q9DA73 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc89Q9DA73 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc89Q9DA73 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.4■□□□□ 0.7
Ccdc89Q9DA73 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc89Q9DA73 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc89Q9DA73 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc89Q9DA73 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc89Q9DA73 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.4■□□□□ 0.7
Ccdc89Q9DA73 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc89Q9DA73 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc89Q9DA73 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccdc89Q9DA73 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc89Q9DA73 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc89Q9DA73 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc89Q9DA73 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc89Q9DA73 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc89Q9DA73 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc89Q9DA73 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ccdc89Q9DA73 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc89Q9DA73 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.39■□□□□ 0.69
Ccdc89Q9DA73 Gm8969-201ENSMUST00000199694 526 ntBASIC19.39■□□□□ 0.69
Ccdc89Q9DA73 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ccdc89Q9DA73 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc89Q9DA73 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc89Q9DA73 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms