Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.75■□□□□ 0.43
Trim42Q9D2H5 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim42Q9D2H5 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim42Q9D2H5 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Trim42Q9D2H5 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim42Q9D2H5 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.74■□□□□ 0.43
Trim42Q9D2H5 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim42Q9D2H5 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trim42Q9D2H5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim42Q9D2H5 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim42Q9D2H5 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Trim42Q9D2H5 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim42Q9D2H5 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim42Q9D2H5 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim42Q9D2H5 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim42Q9D2H5 Gm9847-201ENSMUST00000052528 599 ntBASIC17.74■□□□□ 0.43
Trim42Q9D2H5 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim42Q9D2H5 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
Trim42Q9D2H5 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim42Q9D2H5 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim42Q9D2H5 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim42Q9D2H5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trim42Q9D2H5 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim42Q9D2H5 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim42Q9D2H5 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim42Q9D2H5 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.73■□□□□ 0.43
Trim42Q9D2H5 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim42Q9D2H5 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trim42Q9D2H5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim42Q9D2H5 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim42Q9D2H5 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim42Q9D2H5 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.73■□□□□ 0.43
Trim42Q9D2H5 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim42Q9D2H5 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim42Q9D2H5 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim42Q9D2H5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim42Q9D2H5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim42Q9D2H5 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trim42Q9D2H5 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim42Q9D2H5 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim42Q9D2H5 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim42Q9D2H5 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim42Q9D2H5 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim42Q9D2H5 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim42Q9D2H5 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim42Q9D2H5 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trim42Q9D2H5 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim42Q9D2H5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim42Q9D2H5 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim42Q9D2H5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim42Q9D2H5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim42Q9D2H5 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim42Q9D2H5 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trim42Q9D2H5 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim42Q9D2H5 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.72■□□□□ 0.43
Trim42Q9D2H5 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trim42Q9D2H5 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim42Q9D2H5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim42Q9D2H5 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim42Q9D2H5 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim42Q9D2H5 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim42Q9D2H5 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim42Q9D2H5 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim42Q9D2H5 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim42Q9D2H5 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trim42Q9D2H5 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim42Q9D2H5 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim42Q9D2H5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim42Q9D2H5 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim42Q9D2H5 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trim42Q9D2H5 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim42Q9D2H5 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trim42Q9D2H5 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trim42Q9D2H5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim42Q9D2H5 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim42Q9D2H5 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.71■□□□□ 0.42
Trim42Q9D2H5 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trim42Q9D2H5 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trim42Q9D2H5 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim42Q9D2H5 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim42Q9D2H5 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim42Q9D2H5 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim42Q9D2H5 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.7■□□□□ 0.42
Trim42Q9D2H5 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim42Q9D2H5 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim42Q9D2H5 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.7■□□□□ 0.42
Trim42Q9D2H5 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim42Q9D2H5 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim42Q9D2H5 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim42Q9D2H5 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.7■□□□□ 0.42
Trim42Q9D2H5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim42Q9D2H5 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.7■□□□□ 0.42
Trim42Q9D2H5 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim42Q9D2H5 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.7■□□□□ 0.42
Trim42Q9D2H5 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim42Q9D2H5 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim42Q9D2H5 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trim42Q9D2H5 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim42Q9D2H5 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.7■□□□□ 0.42
Trim42Q9D2H5 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms