Protein–RNA interactions for Protein: Q9D0C1

Rnf115, E3 ubiquitin-protein ligase RNF115, mousemouse

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf115Q9D0C1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rnf115Q9D0C1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf115Q9D0C1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rnf115Q9D0C1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rnf115Q9D0C1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Rnf115Q9D0C1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf115Q9D0C1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf115Q9D0C1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf115Q9D0C1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rnf115Q9D0C1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf115Q9D0C1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf115Q9D0C1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf115Q9D0C1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf115Q9D0C1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf115Q9D0C1 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.2■□□□□ 0.02
Rnf115Q9D0C1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.2■□□□□ 0.02
Rnf115Q9D0C1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.2■□□□□ 0.02
Rnf115Q9D0C1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf115Q9D0C1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf115Q9D0C1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf115Q9D0C1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf115Q9D0C1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf115Q9D0C1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf115Q9D0C1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf115Q9D0C1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf115Q9D0C1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Rnf115Q9D0C1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf115Q9D0C1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf115Q9D0C1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf115Q9D0C1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf115Q9D0C1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf115Q9D0C1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf115Q9D0C1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf115Q9D0C1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf115Q9D0C1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf115Q9D0C1 Gm13559-201ENSMUST00000120476 863 ntBASIC15.19■□□□□ 0.02
Rnf115Q9D0C1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf115Q9D0C1 Gm38285-201ENSMUST00000192928 922 ntBASIC15.19■□□□□ 0.02
Rnf115Q9D0C1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf115Q9D0C1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf115Q9D0C1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rnf115Q9D0C1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rnf115Q9D0C1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf115Q9D0C1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Rnf115Q9D0C1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf115Q9D0C1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf115Q9D0C1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rnf115Q9D0C1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf115Q9D0C1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf115Q9D0C1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf115Q9D0C1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf115Q9D0C1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf115Q9D0C1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rnf115Q9D0C1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.18■□□□□ 0.02
Rnf115Q9D0C1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf115Q9D0C1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rnf115Q9D0C1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf115Q9D0C1 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.18■□□□□ 0.02
Rnf115Q9D0C1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rnf115Q9D0C1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf115Q9D0C1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.18■□□□□ 0.02
Rnf115Q9D0C1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rnf115Q9D0C1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf115Q9D0C1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.18■□□□□ 0.02
Rnf115Q9D0C1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.18■□□□□ 0.02
Rnf115Q9D0C1 Timm23-208ENSMUST00000226683 750 ntBASIC15.18■□□□□ 0.02
Rnf115Q9D0C1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf115Q9D0C1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rnf115Q9D0C1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.18■□□□□ 0.02
Rnf115Q9D0C1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf115Q9D0C1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.17■□□□□ 0.02
Rnf115Q9D0C1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rnf115Q9D0C1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf115Q9D0C1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf115Q9D0C1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf115Q9D0C1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf115Q9D0C1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf115Q9D0C1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.17■□□□□ 0.02
Rnf115Q9D0C1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Rnf115Q9D0C1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf115Q9D0C1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.17■□□□□ 0.02
Rnf115Q9D0C1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.17■□□□□ 0.02
Rnf115Q9D0C1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf115Q9D0C1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.17■□□□□ 0.02
Rnf115Q9D0C1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.17■□□□□ 0.02
Rnf115Q9D0C1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.17■□□□□ 0.02
Rnf115Q9D0C1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rnf115Q9D0C1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.17■□□□□ 0.02
Rnf115Q9D0C1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf115Q9D0C1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.17■□□□□ 0.02
Rnf115Q9D0C1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.17■□□□□ 0.02
Rnf115Q9D0C1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf115Q9D0C1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rnf115Q9D0C1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf115Q9D0C1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf115Q9D0C1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Rnf115Q9D0C1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf115Q9D0C1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Rnf115Q9D0C1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf115Q9D0C1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms