Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hdhd3Q9CYW4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hdhd3Q9CYW4 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hdhd3Q9CYW4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hdhd3Q9CYW4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Hdhd3Q9CYW4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.48□□□□□ -0.09
Hdhd3Q9CYW4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hdhd3Q9CYW4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Hdhd3Q9CYW4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Hdhd3Q9CYW4 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hdhd3Q9CYW4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hdhd3Q9CYW4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hdhd3Q9CYW4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hdhd3Q9CYW4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.47□□□□□ -0.09
Hdhd3Q9CYW4 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.47□□□□□ -0.09
Hdhd3Q9CYW4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Hdhd3Q9CYW4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Hdhd3Q9CYW4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Hdhd3Q9CYW4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hdhd3Q9CYW4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hdhd3Q9CYW4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Hdhd3Q9CYW4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hdhd3Q9CYW4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hdhd3Q9CYW4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hdhd3Q9CYW4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdhd3Q9CYW4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdhd3Q9CYW4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.46□□□□□ -0.09
Hdhd3Q9CYW4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Hdhd3Q9CYW4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdhd3Q9CYW4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.46□□□□□ -0.09
Hdhd3Q9CYW4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdhd3Q9CYW4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdhd3Q9CYW4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdhd3Q9CYW4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdhd3Q9CYW4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Hdhd3Q9CYW4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdhd3Q9CYW4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdhd3Q9CYW4 Gm8969-201ENSMUST00000199694 526 ntBASIC14.46□□□□□ -0.09
Hdhd3Q9CYW4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdhd3Q9CYW4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdhd3Q9CYW4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdhd3Q9CYW4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Hdhd3Q9CYW4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdhd3Q9CYW4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.46□□□□□ -0.09
Hdhd3Q9CYW4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdhd3Q9CYW4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdhd3Q9CYW4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.46□□□□□ -0.09
Hdhd3Q9CYW4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hdhd3Q9CYW4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hdhd3Q9CYW4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hdhd3Q9CYW4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Hdhd3Q9CYW4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hdhd3Q9CYW4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hdhd3Q9CYW4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Hdhd3Q9CYW4 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.45□□□□□ -0.1
Hdhd3Q9CYW4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdhd3Q9CYW4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdhd3Q9CYW4 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.45□□□□□ -0.1
Hdhd3Q9CYW4 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Hdhd3Q9CYW4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.45□□□□□ -0.1
Hdhd3Q9CYW4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hdhd3Q9CYW4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdhd3Q9CYW4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdhd3Q9CYW4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdhd3Q9CYW4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdhd3Q9CYW4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdhd3Q9CYW4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Hdhd3Q9CYW4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdhd3Q9CYW4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdhd3Q9CYW4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdhd3Q9CYW4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdhd3Q9CYW4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdhd3Q9CYW4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdhd3Q9CYW4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Gm21956-201ENSMUST00000179946 522 ntBASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms