Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ssu72Q9CY97 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.68■□□□□ 0.42
Ssu72Q9CY97 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ssu72Q9CY97 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssu72Q9CY97 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ssu72Q9CY97 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssu72Q9CY97 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssu72Q9CY97 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ssu72Q9CY97 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssu72Q9CY97 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssu72Q9CY97 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ssu72Q9CY97 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ssu72Q9CY97 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.67■□□□□ 0.42
Ssu72Q9CY97 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.67■□□□□ 0.42
Ssu72Q9CY97 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssu72Q9CY97 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssu72Q9CY97 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssu72Q9CY97 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssu72Q9CY97 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssu72Q9CY97 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Ssu72Q9CY97 Mir8112-201ENSMUST00000184382 131 ntBASIC17.67■□□□□ 0.42
Ssu72Q9CY97 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.67■□□□□ 0.42
Ssu72Q9CY97 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ssu72Q9CY97 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.67■□□□□ 0.42
Ssu72Q9CY97 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ssu72Q9CY97 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ssu72Q9CY97 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ssu72Q9CY97 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssu72Q9CY97 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssu72Q9CY97 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.67■□□□□ 0.42
Ssu72Q9CY97 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ssu72Q9CY97 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssu72Q9CY97 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssu72Q9CY97 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ssu72Q9CY97 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssu72Q9CY97 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssu72Q9CY97 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Ssu72Q9CY97 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssu72Q9CY97 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ssu72Q9CY97 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ssu72Q9CY97 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssu72Q9CY97 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ssu72Q9CY97 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssu72Q9CY97 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.66■□□□□ 0.42
Ssu72Q9CY97 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssu72Q9CY97 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssu72Q9CY97 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ssu72Q9CY97 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.66■□□□□ 0.42
Ssu72Q9CY97 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Ssu72Q9CY97 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ssu72Q9CY97 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssu72Q9CY97 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ssu72Q9CY97 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssu72Q9CY97 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssu72Q9CY97 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ssu72Q9CY97 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Ssu72Q9CY97 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssu72Q9CY97 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
Ssu72Q9CY97 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ssu72Q9CY97 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssu72Q9CY97 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Ssu72Q9CY97 Gm13234-201ENSMUST00000120010 747 ntBASIC17.65■□□□□ 0.42
Ssu72Q9CY97 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.65■□□□□ 0.42
Ssu72Q9CY97 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssu72Q9CY97 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssu72Q9CY97 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ssu72Q9CY97 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ssu72Q9CY97 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssu72Q9CY97 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssu72Q9CY97 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssu72Q9CY97 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ssu72Q9CY97 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssu72Q9CY97 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssu72Q9CY97 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssu72Q9CY97 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.65■□□□□ 0.42
Ssu72Q9CY97 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssu72Q9CY97 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ssu72Q9CY97 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.64■□□□□ 0.42
Ssu72Q9CY97 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssu72Q9CY97 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssu72Q9CY97 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ssu72Q9CY97 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssu72Q9CY97 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.64■□□□□ 0.41
Ssu72Q9CY97 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssu72Q9CY97 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.64■□□□□ 0.41
Ssu72Q9CY97 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssu72Q9CY97 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ssu72Q9CY97 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssu72Q9CY97 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ssu72Q9CY97 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Ssu72Q9CY97 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssu72Q9CY97 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssu72Q9CY97 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssu72Q9CY97 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssu72Q9CY97 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssu72Q9CY97 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssu72Q9CY97 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ssu72Q9CY97 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ssu72Q9CY97 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssu72Q9CY97 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms