Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Khdc3Q9CWU5 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Khdc3Q9CWU5 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Khdc3Q9CWU5 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.06■□□□□ 0.32
Khdc3Q9CWU5 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Khdc3Q9CWU5 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Khdc3Q9CWU5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Khdc3Q9CWU5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Khdc3Q9CWU5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.05■□□□□ 0.32
Khdc3Q9CWU5 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Khdc3Q9CWU5 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Khdc3Q9CWU5 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Khdc3Q9CWU5 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Khdc3Q9CWU5 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.05■□□□□ 0.32
Khdc3Q9CWU5 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Khdc3Q9CWU5 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Khdc3Q9CWU5 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Khdc3Q9CWU5 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.05■□□□□ 0.32
Khdc3Q9CWU5 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Khdc3Q9CWU5 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Khdc3Q9CWU5 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Khdc3Q9CWU5 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Khdc3Q9CWU5 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Khdc3Q9CWU5 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Khdc3Q9CWU5 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Khdc3Q9CWU5 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc3Q9CWU5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc3Q9CWU5 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc3Q9CWU5 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Khdc3Q9CWU5 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.04■□□□□ 0.32
Khdc3Q9CWU5 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc3Q9CWU5 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc3Q9CWU5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Khdc3Q9CWU5 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.04■□□□□ 0.32
Khdc3Q9CWU5 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc3Q9CWU5 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc3Q9CWU5 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc3Q9CWU5 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc3Q9CWU5 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc3Q9CWU5 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc3Q9CWU5 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc3Q9CWU5 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc3Q9CWU5 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc3Q9CWU5 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc3Q9CWU5 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc3Q9CWU5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc3Q9CWU5 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc3Q9CWU5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc3Q9CWU5 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc3Q9CWU5 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc3Q9CWU5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.03■□□□□ 0.32
Khdc3Q9CWU5 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc3Q9CWU5 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc3Q9CWU5 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc3Q9CWU5 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc3Q9CWU5 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc3Q9CWU5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc3Q9CWU5 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc3Q9CWU5 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc3Q9CWU5 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.03■□□□□ 0.32
Khdc3Q9CWU5 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc3Q9CWU5 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Khdc3Q9CWU5 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc3Q9CWU5 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc3Q9CWU5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.02■□□□□ 0.32
Khdc3Q9CWU5 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Khdc3Q9CWU5 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Khdc3Q9CWU5 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Khdc3Q9CWU5 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Khdc3Q9CWU5 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Khdc3Q9CWU5 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Khdc3Q9CWU5 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Khdc3Q9CWU5 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.02■□□□□ 0.32
Khdc3Q9CWU5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Khdc3Q9CWU5 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Khdc3Q9CWU5 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Khdc3Q9CWU5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Khdc3Q9CWU5 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Khdc3Q9CWU5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Khdc3Q9CWU5 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc3Q9CWU5 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc3Q9CWU5 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc3Q9CWU5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc3Q9CWU5 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.01■□□□□ 0.31
Khdc3Q9CWU5 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc3Q9CWU5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Khdc3Q9CWU5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc3Q9CWU5 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc3Q9CWU5 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc3Q9CWU5 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
Khdc3Q9CWU5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc3Q9CWU5 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Khdc3Q9CWU5 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc3Q9CWU5 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Khdc3Q9CWU5 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Khdc3Q9CWU5 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Khdc3Q9CWU5 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc3Q9CWU5 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Khdc3Q9CWU5 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc3Q9CWU5 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms