Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrrc40Q9CRC8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrrc40Q9CRC8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrrc40Q9CRC8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrrc40Q9CRC8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrrc40Q9CRC8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrc40Q9CRC8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrc40Q9CRC8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrc40Q9CRC8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Lrrc40Q9CRC8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrc40Q9CRC8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrc40Q9CRC8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrc40Q9CRC8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrc40Q9CRC8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrc40Q9CRC8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrc40Q9CRC8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrc40Q9CRC8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.65■□□□□ 0.42
Lrrc40Q9CRC8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Lrrc40Q9CRC8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrc40Q9CRC8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrc40Q9CRC8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.65■□□□□ 0.42
Lrrc40Q9CRC8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.65■□□□□ 0.42
Lrrc40Q9CRC8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.65■□□□□ 0.42
Lrrc40Q9CRC8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrc40Q9CRC8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Lrrc40Q9CRC8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrc40Q9CRC8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Lrrc40Q9CRC8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Lrrc40Q9CRC8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Lrrc40Q9CRC8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrc40Q9CRC8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrc40Q9CRC8 Gm10418-201ENSMUST00000100943 576 ntBASIC17.64■□□□□ 0.41
Lrrc40Q9CRC8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Lrrc40Q9CRC8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.64■□□□□ 0.41
Lrrc40Q9CRC8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrc40Q9CRC8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrc40Q9CRC8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Lrrc40Q9CRC8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrc40Q9CRC8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.64■□□□□ 0.41
Lrrc40Q9CRC8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrc40Q9CRC8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrc40Q9CRC8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.63■□□□□ 0.41
Lrrc40Q9CRC8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Lrrc40Q9CRC8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrc40Q9CRC8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrc40Q9CRC8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrc40Q9CRC8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrc40Q9CRC8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrc40Q9CRC8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrc40Q9CRC8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrc40Q9CRC8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrc40Q9CRC8 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.63■□□□□ 0.41
Lrrc40Q9CRC8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrc40Q9CRC8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrc40Q9CRC8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrc40Q9CRC8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.63■□□□□ 0.41
Lrrc40Q9CRC8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrc40Q9CRC8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrc40Q9CRC8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrc40Q9CRC8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Lrrc40Q9CRC8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.62■□□□□ 0.41
Lrrc40Q9CRC8 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.62■□□□□ 0.41
Lrrc40Q9CRC8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Lrrc40Q9CRC8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrc40Q9CRC8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrc40Q9CRC8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrc40Q9CRC8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.62■□□□□ 0.41
Lrrc40Q9CRC8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrc40Q9CRC8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrc40Q9CRC8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrc40Q9CRC8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrc40Q9CRC8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrc40Q9CRC8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrc40Q9CRC8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lrrc40Q9CRC8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrc40Q9CRC8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrc40Q9CRC8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrc40Q9CRC8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrc40Q9CRC8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrc40Q9CRC8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrc40Q9CRC8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrc40Q9CRC8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrc40Q9CRC8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Lrrc40Q9CRC8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.61■□□□□ 0.41
Lrrc40Q9CRC8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.61■□□□□ 0.41
Lrrc40Q9CRC8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Lrrc40Q9CRC8 Gm5408-201ENSMUST00000197998 747 ntBASIC17.61■□□□□ 0.41
Lrrc40Q9CRC8 Gm29791-202ENSMUST00000207888 369 ntBASIC17.61■□□□□ 0.41
Lrrc40Q9CRC8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.61■□□□□ 0.41
Lrrc40Q9CRC8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrc40Q9CRC8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrc40Q9CRC8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrc40Q9CRC8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrc40Q9CRC8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrc40Q9CRC8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.61■□□□□ 0.41
Lrrc40Q9CRC8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrc40Q9CRC8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrc40Q9CRC8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrc40Q9CRC8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrc40Q9CRC8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms