Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim16Q99PP9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim16Q99PP9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trim16Q99PP9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim16Q99PP9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Trim16Q99PP9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim16Q99PP9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim16Q99PP9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim16Q99PP9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim16Q99PP9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim16Q99PP9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim16Q99PP9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim16Q99PP9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim16Q99PP9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Trim16Q99PP9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim16Q99PP9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim16Q99PP9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim16Q99PP9 Gm29257-201ENSMUST00000186115 639 ntBASIC17.37■□□□□ 0.37
Trim16Q99PP9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim16Q99PP9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim16Q99PP9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim16Q99PP9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim16Q99PP9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim16Q99PP9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim16Q99PP9 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.37■□□□□ 0.37
Trim16Q99PP9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim16Q99PP9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim16Q99PP9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Trim16Q99PP9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim16Q99PP9 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.36■□□□□ 0.37
Trim16Q99PP9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim16Q99PP9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim16Q99PP9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim16Q99PP9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.36■□□□□ 0.37
Trim16Q99PP9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.36■□□□□ 0.37
Trim16Q99PP9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trim16Q99PP9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim16Q99PP9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim16Q99PP9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim16Q99PP9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Trim16Q99PP9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trim16Q99PP9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.36■□□□□ 0.37
Trim16Q99PP9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim16Q99PP9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim16Q99PP9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim16Q99PP9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim16Q99PP9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim16Q99PP9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim16Q99PP9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trim16Q99PP9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim16Q99PP9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trim16Q99PP9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim16Q99PP9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim16Q99PP9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim16Q99PP9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trim16Q99PP9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim16Q99PP9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim16Q99PP9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim16Q99PP9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim16Q99PP9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.35■□□□□ 0.37
Trim16Q99PP9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim16Q99PP9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim16Q99PP9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Trim16Q99PP9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trim16Q99PP9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Trim16Q99PP9 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.35■□□□□ 0.37
Trim16Q99PP9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Trim16Q99PP9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim16Q99PP9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim16Q99PP9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim16Q99PP9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim16Q99PP9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim16Q99PP9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim16Q99PP9 Gm26524-201ENSMUST00000192339 390 ntBASIC17.34■□□□□ 0.37
Trim16Q99PP9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim16Q99PP9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim16Q99PP9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim16Q99PP9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim16Q99PP9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim16Q99PP9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim16Q99PP9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim16Q99PP9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim16Q99PP9 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.34■□□□□ 0.37
Trim16Q99PP9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim16Q99PP9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim16Q99PP9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim16Q99PP9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim16Q99PP9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.33■□□□□ 0.37
Trim16Q99PP9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.33■□□□□ 0.36
Trim16Q99PP9 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.33■□□□□ 0.36
Trim16Q99PP9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim16Q99PP9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trim16Q99PP9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim16Q99PP9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim16Q99PP9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim16Q99PP9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim16Q99PP9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim16Q99PP9 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.32■□□□□ 0.36
Trim16Q99PP9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim16Q99PP9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms