Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2a1Q99PM3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2a1Q99PM3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2a1Q99PM3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2a1Q99PM3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2a1Q99PM3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2a1Q99PM3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.68■□□□□ 0.74
Gtf2a1Q99PM3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2a1Q99PM3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2a1Q99PM3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Gtf2a1Q99PM3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2a1Q99PM3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Gtf2a1Q99PM3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2a1Q99PM3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.68■□□□□ 0.74
Gtf2a1Q99PM3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2a1Q99PM3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2a1Q99PM3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2a1Q99PM3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2a1Q99PM3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2a1Q99PM3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2a1Q99PM3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2a1Q99PM3 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2a1Q99PM3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Gtf2a1Q99PM3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2a1Q99PM3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gtf2a1Q99PM3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gtf2a1Q99PM3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gtf2a1Q99PM3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
Gtf2a1Q99PM3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gtf2a1Q99PM3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gtf2a1Q99PM3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gtf2a1Q99PM3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gtf2a1Q99PM3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gtf2a1Q99PM3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Gtf2a1Q99PM3 Gm45546-201ENSMUST00000211053 2394 ntBASIC19.66■□□□□ 0.74
Gtf2a1Q99PM3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf2a1Q99PM3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf2a1Q99PM3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf2a1Q99PM3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf2a1Q99PM3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf2a1Q99PM3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf2a1Q99PM3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf2a1Q99PM3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf2a1Q99PM3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Gtf2a1Q99PM3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.66■□□□□ 0.74
Gtf2a1Q99PM3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf2a1Q99PM3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf2a1Q99PM3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Gtf2a1Q99PM3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf2a1Q99PM3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf2a1Q99PM3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Gtf2a1Q99PM3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf2a1Q99PM3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Gtf2a1Q99PM3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Gtf2a1Q99PM3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf2a1Q99PM3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf2a1Q99PM3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Gtf2a1Q99PM3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf2a1Q99PM3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.65■□□□□ 0.74
Gtf2a1Q99PM3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf2a1Q99PM3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf2a1Q99PM3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Gtf2a1Q99PM3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf2a1Q99PM3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf2a1Q99PM3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf2a1Q99PM3 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.65■□□□□ 0.74
Gtf2a1Q99PM3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Gtf2a1Q99PM3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf2a1Q99PM3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf2a1Q99PM3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf2a1Q99PM3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Gtf2a1Q99PM3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf2a1Q99PM3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Gtf2a1Q99PM3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Gtf2a1Q99PM3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gtf2a1Q99PM3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gtf2a1Q99PM3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.64■□□□□ 0.73
Gtf2a1Q99PM3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gtf2a1Q99PM3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Gtf2a1Q99PM3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Gtf2a1Q99PM3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gtf2a1Q99PM3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gtf2a1Q99PM3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gtf2a1Q99PM3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Gtf2a1Q99PM3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gtf2a1Q99PM3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Gtf2a1Q99PM3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gtf2a1Q99PM3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Gtf2a1Q99PM3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf2a1Q99PM3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf2a1Q99PM3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Gtf2a1Q99PM3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Gtf2a1Q99PM3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Gtf2a1Q99PM3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf2a1Q99PM3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf2a1Q99PM3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf2a1Q99PM3 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.63■□□□□ 0.73
Gtf2a1Q99PM3 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf2a1Q99PM3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf2a1Q99PM3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms