Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh23Q99PF4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Cdh23Q99PF4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh23Q99PF4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh23Q99PF4 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh23Q99PF4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh23Q99PF4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh23Q99PF4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh23Q99PF4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh23Q99PF4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh23Q99PF4 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cdh23Q99PF4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Cdh23Q99PF4 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh23Q99PF4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.16■□□□□ 0.5
Cdh23Q99PF4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh23Q99PF4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh23Q99PF4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh23Q99PF4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.16■□□□□ 0.5
Cdh23Q99PF4 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.16■□□□□ 0.5
Cdh23Q99PF4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh23Q99PF4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.16■□□□□ 0.5
Cdh23Q99PF4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cdh23Q99PF4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh23Q99PF4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cdh23Q99PF4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh23Q99PF4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh23Q99PF4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh23Q99PF4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh23Q99PF4 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh23Q99PF4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh23Q99PF4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh23Q99PF4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.15■□□□□ 0.5
Cdh23Q99PF4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.15■□□□□ 0.5
Cdh23Q99PF4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cdh23Q99PF4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh23Q99PF4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh23Q99PF4 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.15■□□□□ 0.5
Cdh23Q99PF4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh23Q99PF4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh23Q99PF4 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cdh23Q99PF4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cdh23Q99PF4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cdh23Q99PF4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cdh23Q99PF4 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cdh23Q99PF4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Cdh23Q99PF4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cdh23Q99PF4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cdh23Q99PF4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.14■□□□□ 0.49
Cdh23Q99PF4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh23Q99PF4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh23Q99PF4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.14■□□□□ 0.49
Cdh23Q99PF4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh23Q99PF4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh23Q99PF4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.14■□□□□ 0.49
Cdh23Q99PF4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh23Q99PF4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Cdh23Q99PF4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh23Q99PF4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh23Q99PF4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.14■□□□□ 0.49
Cdh23Q99PF4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh23Q99PF4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh23Q99PF4 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.14■□□□□ 0.49
Cdh23Q99PF4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh23Q99PF4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh23Q99PF4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.13■□□□□ 0.49
Cdh23Q99PF4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh23Q99PF4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh23Q99PF4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh23Q99PF4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh23Q99PF4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh23Q99PF4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh23Q99PF4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh23Q99PF4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh23Q99PF4 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh23Q99PF4 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh23Q99PF4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh23Q99PF4 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.13■□□□□ 0.49
Cdh23Q99PF4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh23Q99PF4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh23Q99PF4 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Cdh23Q99PF4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh23Q99PF4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh23Q99PF4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh23Q99PF4 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.12■□□□□ 0.49
Cdh23Q99PF4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh23Q99PF4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh23Q99PF4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh23Q99PF4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh23Q99PF4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh23Q99PF4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh23Q99PF4 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh23Q99PF4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh23Q99PF4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh23Q99PF4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh23Q99PF4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.11■□□□□ 0.49
Cdh23Q99PF4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh23Q99PF4 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.11■□□□□ 0.49
Cdh23Q99PF4 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh23Q99PF4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh23Q99PF4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms