Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col25a1Q99MQ5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Col25a1Q99MQ5 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Col25a1Q99MQ5 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col25a1Q99MQ5 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Col25a1Q99MQ5 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col25a1Q99MQ5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col25a1Q99MQ5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.38■□□□□ 0.53
Col25a1Q99MQ5 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col25a1Q99MQ5 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col25a1Q99MQ5 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.38■□□□□ 0.53
Col25a1Q99MQ5 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col25a1Q99MQ5 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.38■□□□□ 0.53
Col25a1Q99MQ5 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col25a1Q99MQ5 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col25a1Q99MQ5 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col25a1Q99MQ5 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.38■□□□□ 0.53
Col25a1Q99MQ5 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col25a1Q99MQ5 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col25a1Q99MQ5 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col25a1Q99MQ5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col25a1Q99MQ5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col25a1Q99MQ5 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col25a1Q99MQ5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col25a1Q99MQ5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col25a1Q99MQ5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Col25a1Q99MQ5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col25a1Q99MQ5 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col25a1Q99MQ5 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.37■□□□□ 0.53
Col25a1Q99MQ5 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col25a1Q99MQ5 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col25a1Q99MQ5 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col25a1Q99MQ5 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.37■□□□□ 0.53
Col25a1Q99MQ5 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col25a1Q99MQ5 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Col25a1Q99MQ5 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Col25a1Q99MQ5 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col25a1Q99MQ5 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.37■□□□□ 0.53
Col25a1Q99MQ5 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col25a1Q99MQ5 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col25a1Q99MQ5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col25a1Q99MQ5 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col25a1Q99MQ5 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col25a1Q99MQ5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Col25a1Q99MQ5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col25a1Q99MQ5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Col25a1Q99MQ5 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Col25a1Q99MQ5 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col25a1Q99MQ5 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col25a1Q99MQ5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Col25a1Q99MQ5 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.36■□□□□ 0.53
Col25a1Q99MQ5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col25a1Q99MQ5 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col25a1Q99MQ5 Auts2-212ENSMUST00000178555 309 ntBASIC18.36■□□□□ 0.53
Col25a1Q99MQ5 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.36■□□□□ 0.53
Col25a1Q99MQ5 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.36■□□□□ 0.53
Col25a1Q99MQ5 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Col25a1Q99MQ5 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col25a1Q99MQ5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col25a1Q99MQ5 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col25a1Q99MQ5 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col25a1Q99MQ5 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col25a1Q99MQ5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col25a1Q99MQ5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col25a1Q99MQ5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col25a1Q99MQ5 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.35■□□□□ 0.53
Col25a1Q99MQ5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col25a1Q99MQ5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col25a1Q99MQ5 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col25a1Q99MQ5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col25a1Q99MQ5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col25a1Q99MQ5 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.35■□□□□ 0.53
Col25a1Q99MQ5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col25a1Q99MQ5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col25a1Q99MQ5 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col25a1Q99MQ5 Gm16061-201ENSMUST00000122167 857 ntBASIC18.35■□□□□ 0.53
Col25a1Q99MQ5 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col25a1Q99MQ5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col25a1Q99MQ5 Gm27702-201ENSMUST00000184512 56 ntBASIC18.35■□□□□ 0.53
Col25a1Q99MQ5 Gm18195-201ENSMUST00000207604 706 ntBASIC18.35■□□□□ 0.53
Col25a1Q99MQ5 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col25a1Q99MQ5 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col25a1Q99MQ5 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col25a1Q99MQ5 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col25a1Q99MQ5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col25a1Q99MQ5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col25a1Q99MQ5 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Col25a1Q99MQ5 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col25a1Q99MQ5 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col25a1Q99MQ5 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col25a1Q99MQ5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col25a1Q99MQ5 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col25a1Q99MQ5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col25a1Q99MQ5 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col25a1Q99MQ5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col25a1Q99MQ5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col25a1Q99MQ5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
Col25a1Q99MQ5 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.34■□□□□ 0.53
Col25a1Q99MQ5 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.34■□□□□ 0.53
Col25a1Q99MQ5 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms