Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdca3Q99M54 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdca3Q99M54 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdca3Q99M54 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdca3Q99M54 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cdca3Q99M54 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdca3Q99M54 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdca3Q99M54 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdca3Q99M54 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdca3Q99M54 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdca3Q99M54 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdca3Q99M54 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Cdca3Q99M54 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.47■□□□□ 0.23
Cdca3Q99M54 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdca3Q99M54 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdca3Q99M54 Gm18666-201ENSMUST00000190039 958 ntBASIC16.47■□□□□ 0.23
Cdca3Q99M54 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdca3Q99M54 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdca3Q99M54 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdca3Q99M54 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdca3Q99M54 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdca3Q99M54 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.47■□□□□ 0.23
Cdca3Q99M54 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdca3Q99M54 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdca3Q99M54 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cdca3Q99M54 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Cdca3Q99M54 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdca3Q99M54 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdca3Q99M54 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdca3Q99M54 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.46■□□□□ 0.23
Cdca3Q99M54 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdca3Q99M54 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.46■□□□□ 0.23
Cdca3Q99M54 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.46■□□□□ 0.23
Cdca3Q99M54 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdca3Q99M54 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdca3Q99M54 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.46■□□□□ 0.23
Cdca3Q99M54 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdca3Q99M54 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cdca3Q99M54 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Cdca3Q99M54 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Cdca3Q99M54 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cdca3Q99M54 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cdca3Q99M54 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.45■□□□□ 0.22
Cdca3Q99M54 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdca3Q99M54 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdca3Q99M54 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdca3Q99M54 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cdca3Q99M54 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cdca3Q99M54 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdca3Q99M54 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Cdca3Q99M54 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Cdca3Q99M54 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdca3Q99M54 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cdca3Q99M54 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdca3Q99M54 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
Cdca3Q99M54 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Cdca3Q99M54 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdca3Q99M54 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdca3Q99M54 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdca3Q99M54 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cdca3Q99M54 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.44■□□□□ 0.22
Cdca3Q99M54 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdca3Q99M54 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdca3Q99M54 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdca3Q99M54 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdca3Q99M54 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdca3Q99M54 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Cdca3Q99M54 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cdca3Q99M54 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Cdca3Q99M54 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.44■□□□□ 0.22
Cdca3Q99M54 Gm37055-201ENSMUST00000191866 133 ntBASIC16.44■□□□□ 0.22
Cdca3Q99M54 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.44■□□□□ 0.22
Cdca3Q99M54 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cdca3Q99M54 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.44■□□□□ 0.22
Cdca3Q99M54 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdca3Q99M54 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cdca3Q99M54 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.44■□□□□ 0.22
Cdca3Q99M54 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Cdca3Q99M54 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.44■□□□□ 0.22
Cdca3Q99M54 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdca3Q99M54 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdca3Q99M54 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdca3Q99M54 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.44■□□□□ 0.22
Cdca3Q99M54 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cdca3Q99M54 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cdca3Q99M54 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdca3Q99M54 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cdca3Q99M54 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdca3Q99M54 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdca3Q99M54 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdca3Q99M54 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cdca3Q99M54 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdca3Q99M54 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Cdca3Q99M54 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdca3Q99M54 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cdca3Q99M54 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdca3Q99M54 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdca3Q99M54 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.43■□□□□ 0.22
Cdca3Q99M54 Dio3-201ENSMUST00000097228 1449 ntBASIC16.43■□□□□ 0.22
Cdca3Q99M54 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms