Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb4Q91XZ6 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb4Q91XZ6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.62■□□□□ 0.41
Pcdhb4Q91XZ6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb4Q91XZ6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb4Q91XZ6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhb4Q91XZ6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhb4Q91XZ6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb4Q91XZ6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb4Q91XZ6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb4Q91XZ6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhb4Q91XZ6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb4Q91XZ6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb4Q91XZ6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb4Q91XZ6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb4Q91XZ6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb4Q91XZ6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb4Q91XZ6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb4Q91XZ6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdhb4Q91XZ6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Pcdhb4Q91XZ6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb4Q91XZ6 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdhb4Q91XZ6 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb4Q91XZ6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhb4Q91XZ6 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.61■□□□□ 0.41
Pcdhb4Q91XZ6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb4Q91XZ6 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb4Q91XZ6 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhb4Q91XZ6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb4Q91XZ6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb4Q91XZ6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb4Q91XZ6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb4Q91XZ6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb4Q91XZ6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb4Q91XZ6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdhb4Q91XZ6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb4Q91XZ6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb4Q91XZ6 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb4Q91XZ6 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb4Q91XZ6 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhb4Q91XZ6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb4Q91XZ6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdhb4Q91XZ6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhb4Q91XZ6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Pcdhb4Q91XZ6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb4Q91XZ6 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb4Q91XZ6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb4Q91XZ6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb4Q91XZ6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb4Q91XZ6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb4Q91XZ6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb4Q91XZ6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb4Q91XZ6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb4Q91XZ6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb4Q91XZ6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb4Q91XZ6 Gm7290-201ENSMUST00000104990 617 ntBASIC17.59■□□□□ 0.41
Pcdhb4Q91XZ6 Gm12918-201ENSMUST00000120234 636 ntBASIC17.59■□□□□ 0.41
Pcdhb4Q91XZ6 Gm15710-201ENSMUST00000121821 636 ntBASIC17.59■□□□□ 0.41
Pcdhb4Q91XZ6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb4Q91XZ6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pcdhb4Q91XZ6 Gm5075-201ENSMUST00000196916 622 ntBASIC17.59■□□□□ 0.41
Pcdhb4Q91XZ6 Gm7291-201ENSMUST00000199147 382 ntBASIC17.59■□□□□ 0.41
Pcdhb4Q91XZ6 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.59■□□□□ 0.41
Pcdhb4Q91XZ6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdhb4Q91XZ6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.59■□□□□ 0.41
Pcdhb4Q91XZ6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.59■□□□□ 0.41
Pcdhb4Q91XZ6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb4Q91XZ6 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb4Q91XZ6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb4Q91XZ6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb4Q91XZ6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb4Q91XZ6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb4Q91XZ6 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.58■□□□□ 0.41
Pcdhb4Q91XZ6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.58■□□□□ 0.41
Pcdhb4Q91XZ6 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb4Q91XZ6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Pcdhb4Q91XZ6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Pcdhb4Q91XZ6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Pcdhb4Q91XZ6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pcdhb4Q91XZ6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb4Q91XZ6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
Pcdhb4Q91XZ6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb4Q91XZ6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb4Q91XZ6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb4Q91XZ6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhb4Q91XZ6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb4Q91XZ6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Pcdhb4Q91XZ6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb4Q91XZ6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Pcdhb4Q91XZ6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb4Q91XZ6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.57■□□□□ 0.4
Pcdhb4Q91XZ6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhb4Q91XZ6 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb4Q91XZ6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb4Q91XZ6 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb4Q91XZ6 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb4Q91XZ6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb4Q91XZ6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb4Q91XZ6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb4Q91XZ6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms