Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga3Q91XY5 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga3Q91XY5 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhga3Q91XY5 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga3Q91XY5 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga3Q91XY5 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.82■□□□□ 0.12
Pcdhga3Q91XY5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhga3Q91XY5 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga3Q91XY5 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga3Q91XY5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga3Q91XY5 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga3Q91XY5 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga3Q91XY5 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga3Q91XY5 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhga3Q91XY5 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.81■□□□□ 0.12
Pcdhga3Q91XY5 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.81■□□□□ 0.12
Pcdhga3Q91XY5 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga3Q91XY5 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga3Q91XY5 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga3Q91XY5 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdhga3Q91XY5 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Pcdhga3Q91XY5 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Pcdhga3Q91XY5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdhga3Q91XY5 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga3Q91XY5 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga3Q91XY5 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga3Q91XY5 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhga3Q91XY5 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga3Q91XY5 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.8■□□□□ 0.12
Pcdhga3Q91XY5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.8■□□□□ 0.12
Pcdhga3Q91XY5 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga3Q91XY5 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga3Q91XY5 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga3Q91XY5 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga3Q91XY5 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga3Q91XY5 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga3Q91XY5 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga3Q91XY5 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga3Q91XY5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga3Q91XY5 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhga3Q91XY5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga3Q91XY5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga3Q91XY5 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Pcdhga3Q91XY5 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Pcdhga3Q91XY5 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga3Q91XY5 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Pcdhga3Q91XY5 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga3Q91XY5 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.79■□□□□ 0.12
Pcdhga3Q91XY5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga3Q91XY5 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhga3Q91XY5 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga3Q91XY5 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhga3Q91XY5 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Pcdhga3Q91XY5 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Pcdhga3Q91XY5 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga3Q91XY5 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga3Q91XY5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga3Q91XY5 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga3Q91XY5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga3Q91XY5 Gm13148-201ENSMUST00000118892 745 ntBASIC15.78■□□□□ 0.12
Pcdhga3Q91XY5 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga3Q91XY5 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhga3Q91XY5 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga3Q91XY5 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.78■□□□□ 0.12
Pcdhga3Q91XY5 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga3Q91XY5 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhga3Q91XY5 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga3Q91XY5 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga3Q91XY5 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga3Q91XY5 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga3Q91XY5 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Pcdhga3Q91XY5 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga3Q91XY5 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Pcdhga3Q91XY5 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga3Q91XY5 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga3Q91XY5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga3Q91XY5 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga3Q91XY5 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Pcdhga3Q91XY5 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Pcdhga3Q91XY5 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Pcdhga3Q91XY5 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga3Q91XY5 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdhga3Q91XY5 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Pcdhga3Q91XY5 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.77■□□□□ 0.12
Pcdhga3Q91XY5 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.77■□□□□ 0.12
Pcdhga3Q91XY5 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.77■□□□□ 0.12
Pcdhga3Q91XY5 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga3Q91XY5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Pcdhga3Q91XY5 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga3Q91XY5 Tgds-204ENSMUST00000228543 1594 ntBASIC15.77■□□□□ 0.11
Pcdhga3Q91XY5 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga3Q91XY5 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga3Q91XY5 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga3Q91XY5 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
Pcdhga3Q91XY5 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga3Q91XY5 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Pcdhga3Q91XY5 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga3Q91XY5 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga3Q91XY5 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga3Q91XY5 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms