Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ddx41Q91VN6 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx41Q91VN6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx41Q91VN6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ddx41Q91VN6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx41Q91VN6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx41Q91VN6 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx41Q91VN6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx41Q91VN6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx41Q91VN6 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ddx41Q91VN6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ddx41Q91VN6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx41Q91VN6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx41Q91VN6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx41Q91VN6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ddx41Q91VN6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx41Q91VN6 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx41Q91VN6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ddx41Q91VN6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx41Q91VN6 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx41Q91VN6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx41Q91VN6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx41Q91VN6 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx41Q91VN6 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.31■□□□□ 0.84
Ddx41Q91VN6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ddx41Q91VN6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx41Q91VN6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx41Q91VN6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx41Q91VN6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Ddx41Q91VN6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx41Q91VN6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx41Q91VN6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx41Q91VN6 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx41Q91VN6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ddx41Q91VN6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx41Q91VN6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx41Q91VN6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ddx41Q91VN6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ddx41Q91VN6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx41Q91VN6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.3■□□□□ 0.84
Ddx41Q91VN6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.3■□□□□ 0.84
Ddx41Q91VN6 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.3■□□□□ 0.84
Ddx41Q91VN6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx41Q91VN6 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.3■□□□□ 0.84
Ddx41Q91VN6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx41Q91VN6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx41Q91VN6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.3■□□□□ 0.84
Ddx41Q91VN6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.3■□□□□ 0.84
Ddx41Q91VN6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ddx41Q91VN6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx41Q91VN6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx41Q91VN6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx41Q91VN6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx41Q91VN6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.29■□□□□ 0.84
Ddx41Q91VN6 Gm38285-201ENSMUST00000192928 922 ntBASIC20.29■□□□□ 0.84
Ddx41Q91VN6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.29■□□□□ 0.84
Ddx41Q91VN6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Ddx41Q91VN6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.29■□□□□ 0.84
Ddx41Q91VN6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx41Q91VN6 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx41Q91VN6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Ddx41Q91VN6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx41Q91VN6 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx41Q91VN6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.28■□□□□ 0.84
Ddx41Q91VN6 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.28■□□□□ 0.84
Ddx41Q91VN6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx41Q91VN6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx41Q91VN6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx41Q91VN6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
Ddx41Q91VN6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx41Q91VN6 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ddx41Q91VN6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx41Q91VN6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx41Q91VN6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx41Q91VN6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx41Q91VN6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx41Q91VN6 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx41Q91VN6 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx41Q91VN6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx41Q91VN6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ddx41Q91VN6 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx41Q91VN6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx41Q91VN6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ddx41Q91VN6 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.27■□□□□ 0.84
Ddx41Q91VN6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx41Q91VN6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx41Q91VN6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ddx41Q91VN6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Ddx41Q91VN6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Ddx41Q91VN6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx41Q91VN6 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx41Q91VN6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx41Q91VN6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx41Q91VN6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx41Q91VN6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx41Q91VN6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx41Q91VN6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx41Q91VN6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx41Q91VN6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx41Q91VN6 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms