Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpa1Q8VEE4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rpa1Q8VEE4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Rpa1Q8VEE4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Rpa1Q8VEE4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpa1Q8VEE4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpa1Q8VEE4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Rpa1Q8VEE4 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.89■□□□□ 0.45
Rpa1Q8VEE4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpa1Q8VEE4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpa1Q8VEE4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpa1Q8VEE4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpa1Q8VEE4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpa1Q8VEE4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.89■□□□□ 0.45
Rpa1Q8VEE4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rpa1Q8VEE4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpa1Q8VEE4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpa1Q8VEE4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpa1Q8VEE4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpa1Q8VEE4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
Rpa1Q8VEE4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Rpa1Q8VEE4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rpa1Q8VEE4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpa1Q8VEE4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpa1Q8VEE4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.88■□□□□ 0.45
Rpa1Q8VEE4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpa1Q8VEE4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Rpa1Q8VEE4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpa1Q8VEE4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Rpa1Q8VEE4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpa1Q8VEE4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpa1Q8VEE4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpa1Q8VEE4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpa1Q8VEE4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rpa1Q8VEE4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpa1Q8VEE4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpa1Q8VEE4 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.87■□□□□ 0.45
Rpa1Q8VEE4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpa1Q8VEE4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpa1Q8VEE4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpa1Q8VEE4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Rpa1Q8VEE4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rpa1Q8VEE4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rpa1Q8VEE4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpa1Q8VEE4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpa1Q8VEE4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpa1Q8VEE4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Rpa1Q8VEE4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpa1Q8VEE4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpa1Q8VEE4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpa1Q8VEE4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.87■□□□□ 0.45
Rpa1Q8VEE4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpa1Q8VEE4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rpa1Q8VEE4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpa1Q8VEE4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rpa1Q8VEE4 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.87■□□□□ 0.45
Rpa1Q8VEE4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpa1Q8VEE4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Gm43173-201ENSMUST00000202246 593 ntBASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rpa1Q8VEE4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Rpa1Q8VEE4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpa1Q8VEE4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpa1Q8VEE4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpa1Q8VEE4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpa1Q8VEE4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpa1Q8VEE4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpa1Q8VEE4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Rpa1Q8VEE4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Rpa1Q8VEE4 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rpa1Q8VEE4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpa1Q8VEE4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.85■□□□□ 0.45
Rpa1Q8VEE4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpa1Q8VEE4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpa1Q8VEE4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpa1Q8VEE4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms