Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Retreg1dQ8VE91 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retreg1dQ8VE91 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg1dQ8VE91 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg1dQ8VE91 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.58■□□□□ 0.4
Retreg1dQ8VE91 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg1dQ8VE91 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg1dQ8VE91 Mir6982-201ENSMUST00000184354 68 ntBASIC17.58■□□□□ 0.4
Retreg1dQ8VE91 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.58■□□□□ 0.4
Retreg1dQ8VE91 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg1dQ8VE91 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.58■□□□□ 0.4
Retreg1dQ8VE91 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg1dQ8VE91 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg1dQ8VE91 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Retreg1dQ8VE91 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg1dQ8VE91 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.57■□□□□ 0.4
Retreg1dQ8VE91 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg1dQ8VE91 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg1dQ8VE91 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg1dQ8VE91 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg1dQ8VE91 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.57■□□□□ 0.4
Retreg1dQ8VE91 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.57■□□□□ 0.4
Retreg1dQ8VE91 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg1dQ8VE91 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.57■□□□□ 0.4
Retreg1dQ8VE91 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.57■□□□□ 0.4
Retreg1dQ8VE91 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.57■□□□□ 0.4
Retreg1dQ8VE91 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.57■□□□□ 0.4
Retreg1dQ8VE91 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg1dQ8VE91 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg1dQ8VE91 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg1dQ8VE91 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.57■□□□□ 0.4
Retreg1dQ8VE91 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg1dQ8VE91 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.57■□□□□ 0.4
Retreg1dQ8VE91 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg1dQ8VE91 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.57■□□□□ 0.4
Retreg1dQ8VE91 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg1dQ8VE91 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retreg1dQ8VE91 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retreg1dQ8VE91 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Retreg1dQ8VE91 Gm6576-201ENSMUST00000169678 883 ntBASIC17.56■□□□□ 0.4
Retreg1dQ8VE91 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.56■□□□□ 0.4
Retreg1dQ8VE91 Zfp783-201ENSMUST00000095946 670 ntBASIC17.56■□□□□ 0.4
Retreg1dQ8VE91 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retreg1dQ8VE91 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retreg1dQ8VE91 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.56■□□□□ 0.4
Retreg1dQ8VE91 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Retreg1dQ8VE91 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retreg1dQ8VE91 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg1dQ8VE91 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg1dQ8VE91 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg1dQ8VE91 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg1dQ8VE91 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg1dQ8VE91 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Retreg1dQ8VE91 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Retreg1dQ8VE91 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg1dQ8VE91 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.55■□□□□ 0.4
Retreg1dQ8VE91 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.55■□□□□ 0.4
Retreg1dQ8VE91 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Retreg1dQ8VE91 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg1dQ8VE91 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg1dQ8VE91 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.55■□□□□ 0.4
Retreg1dQ8VE91 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg1dQ8VE91 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg1dQ8VE91 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg1dQ8VE91 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg1dQ8VE91 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg1dQ8VE91 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Retreg1dQ8VE91 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Retreg1dQ8VE91 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retreg1dQ8VE91 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retreg1dQ8VE91 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retreg1dQ8VE91 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retreg1dQ8VE91 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retreg1dQ8VE91 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Retreg1dQ8VE91 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retreg1dQ8VE91 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Retreg1dQ8VE91 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retreg1dQ8VE91 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.54■□□□□ 0.4
Retreg1dQ8VE91 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Retreg1dQ8VE91 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retreg1dQ8VE91 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retreg1dQ8VE91 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Retreg1dQ8VE91 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Retreg1dQ8VE91 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Retreg1dQ8VE91 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retreg1dQ8VE91 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retreg1dQ8VE91 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Retreg1dQ8VE91 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retreg1dQ8VE91 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retreg1dQ8VE91 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retreg1dQ8VE91 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retreg1dQ8VE91 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Retreg1dQ8VE91 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retreg1dQ8VE91 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retreg1dQ8VE91 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retreg1dQ8VE91 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retreg1dQ8VE91 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retreg1dQ8VE91 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retreg1dQ8VE91 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retreg1dQ8VE91 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms