Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpap2Q8VC34 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpap2Q8VC34 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpap2Q8VC34 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpap2Q8VC34 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpap2Q8VC34 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rpap2Q8VC34 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rpap2Q8VC34 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rpap2Q8VC34 Gm11643-201ENSMUST00000119578 864 ntBASIC19.5■□□□□ 0.71
Rpap2Q8VC34 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Rpap2Q8VC34 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.5■□□□□ 0.71
Rpap2Q8VC34 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rpap2Q8VC34 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rpap2Q8VC34 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rpap2Q8VC34 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rpap2Q8VC34 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rpap2Q8VC34 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.5■□□□□ 0.71
Rpap2Q8VC34 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.5■□□□□ 0.71
Rpap2Q8VC34 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rpap2Q8VC34 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
Rpap2Q8VC34 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.49■□□□□ 0.71
Rpap2Q8VC34 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpap2Q8VC34 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpap2Q8VC34 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.49■□□□□ 0.71
Rpap2Q8VC34 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rpap2Q8VC34 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpap2Q8VC34 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpap2Q8VC34 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rpap2Q8VC34 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpap2Q8VC34 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rpap2Q8VC34 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpap2Q8VC34 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpap2Q8VC34 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpap2Q8VC34 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpap2Q8VC34 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
Rpap2Q8VC34 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.48■□□□□ 0.71
Rpap2Q8VC34 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Rpap2Q8VC34 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.48■□□□□ 0.71
Rpap2Q8VC34 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rpap2Q8VC34 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.48■□□□□ 0.71
Rpap2Q8VC34 Gm8969-201ENSMUST00000199694 526 ntBASIC19.48■□□□□ 0.71
Rpap2Q8VC34 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpap2Q8VC34 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpap2Q8VC34 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.48■□□□□ 0.71
Rpap2Q8VC34 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rpap2Q8VC34 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpap2Q8VC34 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpap2Q8VC34 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.47■□□□□ 0.71
Rpap2Q8VC34 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rpap2Q8VC34 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rpap2Q8VC34 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rpap2Q8VC34 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rpap2Q8VC34 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.47■□□□□ 0.71
Rpap2Q8VC34 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.47■□□□□ 0.71
Rpap2Q8VC34 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.47■□□□□ 0.71
Rpap2Q8VC34 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpap2Q8VC34 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpap2Q8VC34 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpap2Q8VC34 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rpap2Q8VC34 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpap2Q8VC34 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rpap2Q8VC34 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rpap2Q8VC34 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Rpap2Q8VC34 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.47■□□□□ 0.71
Rpap2Q8VC34 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Rpap2Q8VC34 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpap2Q8VC34 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpap2Q8VC34 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.46■□□□□ 0.71
Rpap2Q8VC34 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpap2Q8VC34 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpap2Q8VC34 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.46■□□□□ 0.71
Rpap2Q8VC34 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rpap2Q8VC34 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpap2Q8VC34 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpap2Q8VC34 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.46■□□□□ 0.71
Rpap2Q8VC34 Gm18025-201ENSMUST00000221733 862 ntBASIC19.46■□□□□ 0.71
Rpap2Q8VC34 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Rpap2Q8VC34 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.46■□□□□ 0.71
Rpap2Q8VC34 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpap2Q8VC34 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rpap2Q8VC34 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.46■□□□□ 0.71
Rpap2Q8VC34 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpap2Q8VC34 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpap2Q8VC34 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.45■□□□□ 0.7
Rpap2Q8VC34 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rpap2Q8VC34 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rpap2Q8VC34 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpap2Q8VC34 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpap2Q8VC34 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rpap2Q8VC34 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpap2Q8VC34 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.45■□□□□ 0.7
Rpap2Q8VC34 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rpap2Q8VC34 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.45■□□□□ 0.7
Rpap2Q8VC34 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpap2Q8VC34 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpap2Q8VC34 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpap2Q8VC34 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpap2Q8VC34 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.44■□□□□ 0.7
Rpap2Q8VC34 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpap2Q8VC34 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms