Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chrna3Q8R4G9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Chrna3Q8R4G9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.42■□□□□ 0.38
Chrna3Q8R4G9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.42■□□□□ 0.38
Chrna3Q8R4G9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Chrna3Q8R4G9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.42■□□□□ 0.38
Chrna3Q8R4G9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Chrna3Q8R4G9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Chrna3Q8R4G9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Chrna3Q8R4G9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.42■□□□□ 0.38
Chrna3Q8R4G9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chrna3Q8R4G9 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.42■□□□□ 0.38
Chrna3Q8R4G9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.42■□□□□ 0.38
Chrna3Q8R4G9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Chrna3Q8R4G9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chrna3Q8R4G9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chrna3Q8R4G9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chrna3Q8R4G9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna3Q8R4G9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna3Q8R4G9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.41■□□□□ 0.38
Chrna3Q8R4G9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna3Q8R4G9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna3Q8R4G9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna3Q8R4G9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.41■□□□□ 0.38
Chrna3Q8R4G9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna3Q8R4G9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna3Q8R4G9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna3Q8R4G9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Chrna3Q8R4G9 Gm37292-201ENSMUST00000192062 758 ntBASIC17.41■□□□□ 0.38
Chrna3Q8R4G9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna3Q8R4G9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna3Q8R4G9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Chrna3Q8R4G9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna3Q8R4G9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna3Q8R4G9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna3Q8R4G9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna3Q8R4G9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Chrna3Q8R4G9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna3Q8R4G9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna3Q8R4G9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna3Q8R4G9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chrna3Q8R4G9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chrna3Q8R4G9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chrna3Q8R4G9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chrna3Q8R4G9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chrna3Q8R4G9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Chrna3Q8R4G9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.4■□□□□ 0.38
Chrna3Q8R4G9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.4■□□□□ 0.38
Chrna3Q8R4G9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.4■□□□□ 0.38
Chrna3Q8R4G9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
Chrna3Q8R4G9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.4■□□□□ 0.38
Chrna3Q8R4G9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Chrna3Q8R4G9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.4■□□□□ 0.38
Chrna3Q8R4G9 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.4■□□□□ 0.38
Chrna3Q8R4G9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chrna3Q8R4G9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chrna3Q8R4G9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chrna3Q8R4G9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
Chrna3Q8R4G9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Chrna3Q8R4G9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Chrna3Q8R4G9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chrna3Q8R4G9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chrna3Q8R4G9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chrna3Q8R4G9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chrna3Q8R4G9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chrna3Q8R4G9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chrna3Q8R4G9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.39■□□□□ 0.37
Chrna3Q8R4G9 Gm12382-201ENSMUST00000122005 922 ntBASIC17.39■□□□□ 0.37
Chrna3Q8R4G9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Chrna3Q8R4G9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Chrna3Q8R4G9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chrna3Q8R4G9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Chrna3Q8R4G9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chrna3Q8R4G9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Chrna3Q8R4G9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 156.9 ms