Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdt1Q8R4E9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cdt1Q8R4E9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cdt1Q8R4E9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cdt1Q8R4E9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdt1Q8R4E9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdt1Q8R4E9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdt1Q8R4E9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdt1Q8R4E9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdt1Q8R4E9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdt1Q8R4E9 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.18■□□□□ 0.34
Cdt1Q8R4E9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdt1Q8R4E9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdt1Q8R4E9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdt1Q8R4E9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdt1Q8R4E9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cdt1Q8R4E9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cdt1Q8R4E9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdt1Q8R4E9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdt1Q8R4E9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdt1Q8R4E9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdt1Q8R4E9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdt1Q8R4E9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Cdt1Q8R4E9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdt1Q8R4E9 Gm2399-201ENSMUST00000104944 225 ntBASIC17.17■□□□□ 0.34
Cdt1Q8R4E9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.17■□□□□ 0.34
Cdt1Q8R4E9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdt1Q8R4E9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.17■□□□□ 0.34
Cdt1Q8R4E9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.17■□□□□ 0.34
Cdt1Q8R4E9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.17■□□□□ 0.34
Cdt1Q8R4E9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdt1Q8R4E9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdt1Q8R4E9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdt1Q8R4E9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdt1Q8R4E9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Cdt1Q8R4E9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.16■□□□□ 0.34
Cdt1Q8R4E9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdt1Q8R4E9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdt1Q8R4E9 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.16■□□□□ 0.34
Cdt1Q8R4E9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.16■□□□□ 0.34
Cdt1Q8R4E9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdt1Q8R4E9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdt1Q8R4E9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdt1Q8R4E9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdt1Q8R4E9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdt1Q8R4E9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cdt1Q8R4E9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.16■□□□□ 0.34
Cdt1Q8R4E9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdt1Q8R4E9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdt1Q8R4E9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdt1Q8R4E9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdt1Q8R4E9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cdt1Q8R4E9 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.16■□□□□ 0.34
Cdt1Q8R4E9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdt1Q8R4E9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdt1Q8R4E9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdt1Q8R4E9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdt1Q8R4E9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdt1Q8R4E9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdt1Q8R4E9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdt1Q8R4E9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
Cdt1Q8R4E9 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.15■□□□□ 0.34
Cdt1Q8R4E9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.15■□□□□ 0.34
Cdt1Q8R4E9 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.15■□□□□ 0.34
Cdt1Q8R4E9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdt1Q8R4E9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdt1Q8R4E9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdt1Q8R4E9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdt1Q8R4E9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdt1Q8R4E9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdt1Q8R4E9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cdt1Q8R4E9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.15■□□□□ 0.34
Cdt1Q8R4E9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdt1Q8R4E9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cdt1Q8R4E9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.34
Cdt1Q8R4E9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Cdt1Q8R4E9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdt1Q8R4E9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.14■□□□□ 0.33
Cdt1Q8R4E9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdt1Q8R4E9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.14■□□□□ 0.33
Cdt1Q8R4E9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.14■□□□□ 0.33
Cdt1Q8R4E9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdt1Q8R4E9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.14■□□□□ 0.33
Cdt1Q8R4E9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.14■□□□□ 0.33
Cdt1Q8R4E9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.14■□□□□ 0.33
Cdt1Q8R4E9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdt1Q8R4E9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdt1Q8R4E9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cdt1Q8R4E9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdt1Q8R4E9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdt1Q8R4E9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdt1Q8R4E9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdt1Q8R4E9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cdt1Q8R4E9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdt1Q8R4E9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdt1Q8R4E9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cdt1Q8R4E9 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.13■□□□□ 0.33
Cdt1Q8R4E9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cdt1Q8R4E9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.13■□□□□ 0.33
Cdt1Q8R4E9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms