Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cystm1Q8K353 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC11.15□□□□□ -0.62
Cystm1Q8K353 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Cystm1Q8K353 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC11.15□□□□□ -0.62
Cystm1Q8K353 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cystm1Q8K353 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC11.15□□□□□ -0.62
Cystm1Q8K353 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cystm1Q8K353 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Cystm1Q8K353 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cystm1Q8K353 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cystm1Q8K353 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cystm1Q8K353 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cystm1Q8K353 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cystm1Q8K353 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cystm1Q8K353 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cystm1Q8K353 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cystm1Q8K353 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.63
Cystm1Q8K353 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cystm1Q8K353 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Cystm1Q8K353 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cystm1Q8K353 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC11.14□□□□□ -0.63
Cystm1Q8K353 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Cystm1Q8K353 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cystm1Q8K353 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC11.14□□□□□ -0.63
Cystm1Q8K353 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC11.14□□□□□ -0.63
Cystm1Q8K353 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cystm1Q8K353 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cystm1Q8K353 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC11.14□□□□□ -0.63
Cystm1Q8K353 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cystm1Q8K353 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Cystm1Q8K353 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cystm1Q8K353 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cystm1Q8K353 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC11.14□□□□□ -0.63
Cystm1Q8K353 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cystm1Q8K353 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cystm1Q8K353 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cystm1Q8K353 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC11.14□□□□□ -0.63
Cystm1Q8K353 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cystm1Q8K353 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cystm1Q8K353 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cystm1Q8K353 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC11.13□□□□□ -0.63
Cystm1Q8K353 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cystm1Q8K353 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cystm1Q8K353 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cystm1Q8K353 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cystm1Q8K353 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC11.13□□□□□ -0.63
Cystm1Q8K353 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cystm1Q8K353 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cystm1Q8K353 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cystm1Q8K353 AC137127.1-201ENSMUST00000213466 1078 ntBASIC11.13□□□□□ -0.63
Cystm1Q8K353 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC11.13□□□□□ -0.63
Cystm1Q8K353 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cystm1Q8K353 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cystm1Q8K353 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cystm1Q8K353 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cystm1Q8K353 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cystm1Q8K353 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cystm1Q8K353 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cystm1Q8K353 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cystm1Q8K353 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cystm1Q8K353 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC11.13□□□□□ -0.63
Cystm1Q8K353 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cystm1Q8K353 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cystm1Q8K353 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cystm1Q8K353 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cystm1Q8K353 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Gm11421-201ENSMUST00000122124 294 ntBASIC11.12□□□□□ -0.63
Cystm1Q8K353 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Gm37519-201ENSMUST00000191687 2210 ntBASIC11.12□□□□□ -0.63
Cystm1Q8K353 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cystm1Q8K353 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cystm1Q8K353 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms