Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtn1Q8K0T0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtn1Q8K0T0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Rtn1Q8K0T0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn1Q8K0T0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn1Q8K0T0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn1Q8K0T0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn1Q8K0T0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn1Q8K0T0 Gm5643-201ENSMUST00000117081 966 ntBASIC20.5■□□□□ 0.87
Rtn1Q8K0T0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.5■□□□□ 0.87
Rtn1Q8K0T0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn1Q8K0T0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn1Q8K0T0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Rtn1Q8K0T0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.5■□□□□ 0.87
Rtn1Q8K0T0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn1Q8K0T0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn1Q8K0T0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn1Q8K0T0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn1Q8K0T0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn1Q8K0T0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtn1Q8K0T0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rtn1Q8K0T0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtn1Q8K0T0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtn1Q8K0T0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.49■□□□□ 0.87
Rtn1Q8K0T0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.49■□□□□ 0.87
Rtn1Q8K0T0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtn1Q8K0T0 Gm29791-202ENSMUST00000207888 369 ntBASIC20.49■□□□□ 0.87
Rtn1Q8K0T0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.49■□□□□ 0.87
Rtn1Q8K0T0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
Rtn1Q8K0T0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtn1Q8K0T0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtn1Q8K0T0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtn1Q8K0T0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtn1Q8K0T0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rtn1Q8K0T0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtn1Q8K0T0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtn1Q8K0T0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtn1Q8K0T0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtn1Q8K0T0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn1Q8K0T0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn1Q8K0T0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn1Q8K0T0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Rtn1Q8K0T0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.47■□□□□ 0.87
Rtn1Q8K0T0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.47■□□□□ 0.87
Rtn1Q8K0T0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn1Q8K0T0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.47■□□□□ 0.87
Rtn1Q8K0T0 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.47■□□□□ 0.87
Rtn1Q8K0T0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn1Q8K0T0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Rtn1Q8K0T0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn1Q8K0T0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rtn1Q8K0T0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn1Q8K0T0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn1Q8K0T0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn1Q8K0T0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn1Q8K0T0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn1Q8K0T0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn1Q8K0T0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn1Q8K0T0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn1Q8K0T0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn1Q8K0T0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn1Q8K0T0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn1Q8K0T0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn1Q8K0T0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn1Q8K0T0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn1Q8K0T0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn1Q8K0T0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn1Q8K0T0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.46■□□□□ 0.87
Rtn1Q8K0T0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn1Q8K0T0 Gm18025-201ENSMUST00000221733 862 ntBASIC20.46■□□□□ 0.87
Rtn1Q8K0T0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn1Q8K0T0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn1Q8K0T0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn1Q8K0T0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn1Q8K0T0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.46■□□□□ 0.87
Rtn1Q8K0T0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn1Q8K0T0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.46■□□□□ 0.87
Rtn1Q8K0T0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn1Q8K0T0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn1Q8K0T0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn1Q8K0T0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn1Q8K0T0 Gm10418-201ENSMUST00000100943 576 ntBASIC20.45■□□□□ 0.86
Rtn1Q8K0T0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Rtn1Q8K0T0 Gm13168-201ENSMUST00000121771 632 ntBASIC20.45■□□□□ 0.86
Rtn1Q8K0T0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn1Q8K0T0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn1Q8K0T0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn1Q8K0T0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn1Q8K0T0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn1Q8K0T0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.44■□□□□ 0.86
Rtn1Q8K0T0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn1Q8K0T0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Rtn1Q8K0T0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.44■□□□□ 0.86
Rtn1Q8K0T0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn1Q8K0T0 Gm42545-201ENSMUST00000202755 922 ntBASIC20.44■□□□□ 0.86
Rtn1Q8K0T0 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.44■□□□□ 0.86
Rtn1Q8K0T0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn1Q8K0T0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn1Q8K0T0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Rtn1Q8K0T0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms