Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nup88Q8CEC0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.93■□□□□ 0.94
Nup88Q8CEC0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nup88Q8CEC0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nup88Q8CEC0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nup88Q8CEC0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nup88Q8CEC0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.93■□□□□ 0.94
Nup88Q8CEC0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Nup88Q8CEC0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nup88Q8CEC0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nup88Q8CEC0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nup88Q8CEC0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nup88Q8CEC0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nup88Q8CEC0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.92■□□□□ 0.94
Nup88Q8CEC0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.92■□□□□ 0.94
Nup88Q8CEC0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nup88Q8CEC0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nup88Q8CEC0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nup88Q8CEC0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nup88Q8CEC0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nup88Q8CEC0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nup88Q8CEC0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nup88Q8CEC0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nup88Q8CEC0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.91■□□□□ 0.94
Nup88Q8CEC0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.91■□□□□ 0.94
Nup88Q8CEC0 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.91■□□□□ 0.94
Nup88Q8CEC0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nup88Q8CEC0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nup88Q8CEC0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nup88Q8CEC0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nup88Q8CEC0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.91■□□□□ 0.94
Nup88Q8CEC0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nup88Q8CEC0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nup88Q8CEC0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nup88Q8CEC0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nup88Q8CEC0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nup88Q8CEC0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nup88Q8CEC0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Nup88Q8CEC0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nup88Q8CEC0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Nup88Q8CEC0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nup88Q8CEC0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nup88Q8CEC0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.9■□□□□ 0.94
Nup88Q8CEC0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.9■□□□□ 0.94
Nup88Q8CEC0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Nup88Q8CEC0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nup88Q8CEC0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nup88Q8CEC0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.89■□□□□ 0.94
Nup88Q8CEC0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nup88Q8CEC0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Nup88Q8CEC0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nup88Q8CEC0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nup88Q8CEC0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nup88Q8CEC0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Nup88Q8CEC0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.89■□□□□ 0.93
Nup88Q8CEC0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nup88Q8CEC0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nup88Q8CEC0 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.89■□□□□ 0.93
Nup88Q8CEC0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nup88Q8CEC0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Nup88Q8CEC0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nup88Q8CEC0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nup88Q8CEC0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nup88Q8CEC0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nup88Q8CEC0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nup88Q8CEC0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nup88Q8CEC0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nup88Q8CEC0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.88■□□□□ 0.93
Nup88Q8CEC0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.88■□□□□ 0.93
Nup88Q8CEC0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nup88Q8CEC0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nup88Q8CEC0 Tgds-204ENSMUST00000228543 1594 ntBASIC20.88■□□□□ 0.93
Nup88Q8CEC0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nup88Q8CEC0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Nup88Q8CEC0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nup88Q8CEC0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nup88Q8CEC0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nup88Q8CEC0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nup88Q8CEC0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.87■□□□□ 0.93
Nup88Q8CEC0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nup88Q8CEC0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nup88Q8CEC0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nup88Q8CEC0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nup88Q8CEC0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nup88Q8CEC0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Nup88Q8CEC0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nup88Q8CEC0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nup88Q8CEC0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nup88Q8CEC0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Nup88Q8CEC0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Nup88Q8CEC0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nup88Q8CEC0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Nup88Q8CEC0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nup88Q8CEC0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.86■□□□□ 0.93
Nup88Q8CEC0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nup88Q8CEC0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Nup88Q8CEC0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nup88Q8CEC0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nup88Q8CEC0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nup88Q8CEC0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms