Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Lysmd4Q8CC84 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Lysmd4Q8CC84 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Lysmd4Q8CC84 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.97■□□□□ 0.15
Lysmd4Q8CC84 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lysmd4Q8CC84 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Lysmd4Q8CC84 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lysmd4Q8CC84 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Lysmd4Q8CC84 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Lysmd4Q8CC84 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Lysmd4Q8CC84 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.96■□□□□ 0.15
Lysmd4Q8CC84 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Lysmd4Q8CC84 Reep4-203ENSMUST00000226563 1444 ntBASIC15.96■□□□□ 0.15
Lysmd4Q8CC84 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Lysmd4Q8CC84 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Lysmd4Q8CC84 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Lysmd4Q8CC84 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Lysmd4Q8CC84 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Lysmd4Q8CC84 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.96■□□□□ 0.15
Lysmd4Q8CC84 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Lysmd4Q8CC84 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.96■□□□□ 0.15
Lysmd4Q8CC84 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Lysmd4Q8CC84 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Lysmd4Q8CC84 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Lysmd4Q8CC84 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Lysmd4Q8CC84 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
Lysmd4Q8CC84 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Lysmd4Q8CC84 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Lysmd4Q8CC84 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Lysmd4Q8CC84 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.96■□□□□ 0.14
Lysmd4Q8CC84 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Lysmd4Q8CC84 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.95■□□□□ 0.14
Lysmd4Q8CC84 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Lysmd4Q8CC84 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.95■□□□□ 0.14
Lysmd4Q8CC84 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Lysmd4Q8CC84 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Lysmd4Q8CC84 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Lysmd4Q8CC84 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Lysmd4Q8CC84 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Lysmd4Q8CC84 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.95■□□□□ 0.14
Lysmd4Q8CC84 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC15.95■□□□□ 0.14
Lysmd4Q8CC84 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Lysmd4Q8CC84 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Lysmd4Q8CC84 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Lysmd4Q8CC84 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Lysmd4Q8CC84 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Lysmd4Q8CC84 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Lysmd4Q8CC84 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Lysmd4Q8CC84 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Lysmd4Q8CC84 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.95■□□□□ 0.14
Lysmd4Q8CC84 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Lysmd4Q8CC84 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.94■□□□□ 0.14
Lysmd4Q8CC84 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Lysmd4Q8CC84 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Lysmd4Q8CC84 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Lysmd4Q8CC84 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Lysmd4Q8CC84 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.94■□□□□ 0.14
Lysmd4Q8CC84 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Lysmd4Q8CC84 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.94■□□□□ 0.14
Lysmd4Q8CC84 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Lysmd4Q8CC84 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Lysmd4Q8CC84 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Lysmd4Q8CC84 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Lysmd4Q8CC84 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Lysmd4Q8CC84 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Lysmd4Q8CC84 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Lysmd4Q8CC84 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Lysmd4Q8CC84 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.94■□□□□ 0.14
Lysmd4Q8CC84 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.94■□□□□ 0.14
Lysmd4Q8CC84 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.94■□□□□ 0.14
Lysmd4Q8CC84 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lysmd4Q8CC84 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lysmd4Q8CC84 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Lysmd4Q8CC84 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Lysmd4Q8CC84 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Lysmd4Q8CC84 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lysmd4Q8CC84 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Lysmd4Q8CC84 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Lysmd4Q8CC84 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Lysmd4Q8CC84 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.93■□□□□ 0.14
Lysmd4Q8CC84 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.93■□□□□ 0.14
Lysmd4Q8CC84 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.93■□□□□ 0.14
Lysmd4Q8CC84 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lysmd4Q8CC84 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lysmd4Q8CC84 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.93■□□□□ 0.14
Lysmd4Q8CC84 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lysmd4Q8CC84 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lysmd4Q8CC84 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lysmd4Q8CC84 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms