Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trerf1Q8BXJ2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trerf1Q8BXJ2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trerf1Q8BXJ2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trerf1Q8BXJ2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trerf1Q8BXJ2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trerf1Q8BXJ2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trerf1Q8BXJ2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trerf1Q8BXJ2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trerf1Q8BXJ2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trerf1Q8BXJ2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trerf1Q8BXJ2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trerf1Q8BXJ2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trerf1Q8BXJ2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trerf1Q8BXJ2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trerf1Q8BXJ2 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.66■□□□□ 0.58
Trerf1Q8BXJ2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trerf1Q8BXJ2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trerf1Q8BXJ2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Trerf1Q8BXJ2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Trerf1Q8BXJ2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Trerf1Q8BXJ2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trerf1Q8BXJ2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trerf1Q8BXJ2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trerf1Q8BXJ2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trerf1Q8BXJ2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.66■□□□□ 0.58
Trerf1Q8BXJ2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trerf1Q8BXJ2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trerf1Q8BXJ2 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.65■□□□□ 0.58
Trerf1Q8BXJ2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trerf1Q8BXJ2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trerf1Q8BXJ2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trerf1Q8BXJ2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trerf1Q8BXJ2 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.65■□□□□ 0.58
Trerf1Q8BXJ2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trerf1Q8BXJ2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trerf1Q8BXJ2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trerf1Q8BXJ2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trerf1Q8BXJ2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trerf1Q8BXJ2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trerf1Q8BXJ2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trerf1Q8BXJ2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trerf1Q8BXJ2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trerf1Q8BXJ2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trerf1Q8BXJ2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trerf1Q8BXJ2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trerf1Q8BXJ2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trerf1Q8BXJ2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trerf1Q8BXJ2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Trerf1Q8BXJ2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.64■□□□□ 0.57
Trerf1Q8BXJ2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trerf1Q8BXJ2 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.64■□□□□ 0.57
Trerf1Q8BXJ2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trerf1Q8BXJ2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trerf1Q8BXJ2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trerf1Q8BXJ2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trerf1Q8BXJ2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trerf1Q8BXJ2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.64■□□□□ 0.57
Trerf1Q8BXJ2 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.64■□□□□ 0.57
Trerf1Q8BXJ2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trerf1Q8BXJ2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trerf1Q8BXJ2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.63■□□□□ 0.57
Trerf1Q8BXJ2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trerf1Q8BXJ2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trerf1Q8BXJ2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trerf1Q8BXJ2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trerf1Q8BXJ2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trerf1Q8BXJ2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.63■□□□□ 0.57
Trerf1Q8BXJ2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trerf1Q8BXJ2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trerf1Q8BXJ2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.63■□□□□ 0.57
Trerf1Q8BXJ2 Rab3c-203ENSMUST00000224180 967 ntBASIC18.63■□□□□ 0.57
Trerf1Q8BXJ2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.63■□□□□ 0.57
Trerf1Q8BXJ2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trerf1Q8BXJ2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trerf1Q8BXJ2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trerf1Q8BXJ2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trerf1Q8BXJ2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trerf1Q8BXJ2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trerf1Q8BXJ2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trerf1Q8BXJ2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.63■□□□□ 0.57
Trerf1Q8BXJ2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trerf1Q8BXJ2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trerf1Q8BXJ2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trerf1Q8BXJ2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Trerf1Q8BXJ2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trerf1Q8BXJ2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.62■□□□□ 0.57
Trerf1Q8BXJ2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trerf1Q8BXJ2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trerf1Q8BXJ2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trerf1Q8BXJ2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trerf1Q8BXJ2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trerf1Q8BXJ2 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.62■□□□□ 0.57
Trerf1Q8BXJ2 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trerf1Q8BXJ2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trerf1Q8BXJ2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trerf1Q8BXJ2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.61■□□□□ 0.57
Trerf1Q8BXJ2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trerf1Q8BXJ2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trerf1Q8BXJ2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms