Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.07■□□□□ 0.32
Rfx4Q7TNK1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx4Q7TNK1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx4Q7TNK1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx4Q7TNK1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx4Q7TNK1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx4Q7TNK1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx4Q7TNK1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx4Q7TNK1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx4Q7TNK1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx4Q7TNK1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx4Q7TNK1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx4Q7TNK1 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx4Q7TNK1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx4Q7TNK1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx4Q7TNK1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx4Q7TNK1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx4Q7TNK1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx4Q7TNK1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx4Q7TNK1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx4Q7TNK1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx4Q7TNK1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx4Q7TNK1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Rfx4Q7TNK1 Gm22325-201ENSMUST00000158904 308 ntBASIC17.05■□□□□ 0.32
Rfx4Q7TNK1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.05■□□□□ 0.32
Rfx4Q7TNK1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx4Q7TNK1 Mir7075-201ENSMUST00000184187 82 ntBASIC17.05■□□□□ 0.32
Rfx4Q7TNK1 Gm43173-201ENSMUST00000202246 593 ntBASIC17.05■□□□□ 0.32
Rfx4Q7TNK1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rfx4Q7TNK1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx4Q7TNK1 Idnk-204ENSMUST00000226010 1898 ntBASIC17.05■□□□□ 0.32
Rfx4Q7TNK1 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.05■□□□□ 0.32
Rfx4Q7TNK1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.05■□□□□ 0.32
Rfx4Q7TNK1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx4Q7TNK1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx4Q7TNK1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx4Q7TNK1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx4Q7TNK1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx4Q7TNK1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx4Q7TNK1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.04■□□□□ 0.32
Rfx4Q7TNK1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx4Q7TNK1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx4Q7TNK1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx4Q7TNK1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx4Q7TNK1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx4Q7TNK1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx4Q7TNK1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx4Q7TNK1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rfx4Q7TNK1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx4Q7TNK1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx4Q7TNK1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx4Q7TNK1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rfx4Q7TNK1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx4Q7TNK1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx4Q7TNK1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx4Q7TNK1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.03■□□□□ 0.32
Rfx4Q7TNK1 Gm13241-201ENSMUST00000094493 780 ntBASIC17.03■□□□□ 0.32
Rfx4Q7TNK1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx4Q7TNK1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx4Q7TNK1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rfx4Q7TNK1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx4Q7TNK1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx4Q7TNK1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rfx4Q7TNK1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rfx4Q7TNK1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx4Q7TNK1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rfx4Q7TNK1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx4Q7TNK1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx4Q7TNK1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx4Q7TNK1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms