Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Casc1Q6TDU8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Casc1Q6TDU8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Casc1Q6TDU8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.2■□□□□ 0.98
Casc1Q6TDU8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Casc1Q6TDU8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Casc1Q6TDU8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Casc1Q6TDU8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Casc1Q6TDU8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Casc1Q6TDU8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Casc1Q6TDU8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Casc1Q6TDU8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Casc1Q6TDU8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Casc1Q6TDU8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Casc1Q6TDU8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Casc1Q6TDU8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Casc1Q6TDU8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Casc1Q6TDU8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Casc1Q6TDU8 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.19■□□□□ 0.98
Casc1Q6TDU8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Casc1Q6TDU8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Casc1Q6TDU8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Casc1Q6TDU8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.19■□□□□ 0.98
Casc1Q6TDU8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Casc1Q6TDU8 Gm4968-201ENSMUST00000071458 858 ntBASIC21.19■□□□□ 0.98
Casc1Q6TDU8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Casc1Q6TDU8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Casc1Q6TDU8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
Casc1Q6TDU8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Casc1Q6TDU8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Casc1Q6TDU8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Casc1Q6TDU8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Casc1Q6TDU8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Casc1Q6TDU8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Casc1Q6TDU8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Casc1Q6TDU8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Casc1Q6TDU8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Casc1Q6TDU8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Casc1Q6TDU8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Casc1Q6TDU8 Gm5408-201ENSMUST00000197998 747 ntBASIC21.18■□□□□ 0.98
Casc1Q6TDU8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Casc1Q6TDU8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.18■□□□□ 0.98
Casc1Q6TDU8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Casc1Q6TDU8 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.18■□□□□ 0.98
Casc1Q6TDU8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Casc1Q6TDU8 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.18■□□□□ 0.98
Casc1Q6TDU8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Casc1Q6TDU8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Casc1Q6TDU8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Casc1Q6TDU8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Casc1Q6TDU8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Casc1Q6TDU8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Casc1Q6TDU8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Casc1Q6TDU8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Casc1Q6TDU8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Casc1Q6TDU8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Casc1Q6TDU8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Casc1Q6TDU8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Casc1Q6TDU8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Casc1Q6TDU8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Casc1Q6TDU8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Casc1Q6TDU8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Casc1Q6TDU8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Casc1Q6TDU8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Casc1Q6TDU8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC21.16■□□□□ 0.98
Casc1Q6TDU8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Casc1Q6TDU8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Casc1Q6TDU8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Casc1Q6TDU8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Casc1Q6TDU8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Casc1Q6TDU8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Casc1Q6TDU8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Casc1Q6TDU8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Casc1Q6TDU8 Gm12441-201ENSMUST00000121806 588 ntBASIC21.15■□□□□ 0.98
Casc1Q6TDU8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.15■□□□□ 0.98
Casc1Q6TDU8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Casc1Q6TDU8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Casc1Q6TDU8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Casc1Q6TDU8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Casc1Q6TDU8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Casc1Q6TDU8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Casc1Q6TDU8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Casc1Q6TDU8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Casc1Q6TDU8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Casc1Q6TDU8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Casc1Q6TDU8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Casc1Q6TDU8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.14■□□□□ 0.98
Casc1Q6TDU8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
Casc1Q6TDU8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Casc1Q6TDU8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Casc1Q6TDU8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Casc1Q6TDU8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Casc1Q6TDU8 Gm26524-201ENSMUST00000192339 390 ntBASIC21.14■□□□□ 0.97
Casc1Q6TDU8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Casc1Q6TDU8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Casc1Q6TDU8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.14■□□□□ 0.97
Casc1Q6TDU8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Casc1Q6TDU8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Casc1Q6TDU8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Casc1Q6TDU8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms