Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
Ripk1Q60855 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ripk1Q60855 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ripk1Q60855 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ripk1Q60855 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ripk1Q60855 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
Ripk1Q60855 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.76■□□□□ 0.27
Ripk1Q60855 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.75■□□□□ 0.27
Ripk1Q60855 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ripk1Q60855 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ripk1Q60855 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ripk1Q60855 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ripk1Q60855 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.75■□□□□ 0.27
Ripk1Q60855 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ripk1Q60855 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ripk1Q60855 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.75■□□□□ 0.27
Ripk1Q60855 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ripk1Q60855 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ripk1Q60855 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Ripk1Q60855 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ripk1Q60855 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Ripk1Q60855 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ripk1Q60855 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ripk1Q60855 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ripk1Q60855 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ripk1Q60855 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ripk1Q60855 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ripk1Q60855 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ripk1Q60855 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ripk1Q60855 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ripk1Q60855 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ripk1Q60855 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ripk1Q60855 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ripk1Q60855 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ripk1Q60855 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ripk1Q60855 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ripk1Q60855 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ripk1Q60855 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ripk1Q60855 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ripk1Q60855 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk1Q60855 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk1Q60855 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk1Q60855 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.73■□□□□ 0.27
Ripk1Q60855 Gm5408-201ENSMUST00000197998 747 ntBASIC16.73■□□□□ 0.27
Ripk1Q60855 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ripk1Q60855 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.73■□□□□ 0.27
Ripk1Q60855 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk1Q60855 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk1Q60855 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk1Q60855 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk1Q60855 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk1Q60855 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk1Q60855 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk1Q60855 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk1Q60855 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk1Q60855 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk1Q60855 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk1Q60855 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk1Q60855 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ripk1Q60855 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk1Q60855 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk1Q60855 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk1Q60855 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
Ripk1Q60855 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ripk1Q60855 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.72■□□□□ 0.27
Ripk1Q60855 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Ripk1Q60855 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ripk1Q60855 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.72■□□□□ 0.27
Ripk1Q60855 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ripk1Q60855 Gm10602-201ENSMUST00000098239 609 ntBASIC16.72■□□□□ 0.27
Ripk1Q60855 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk1Q60855 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk1Q60855 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk1Q60855 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
Ripk1Q60855 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk1Q60855 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Ripk1Q60855 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ripk1Q60855 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ripk1Q60855 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ripk1Q60855 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ripk1Q60855 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ripk1Q60855 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.71■□□□□ 0.27
Ripk1Q60855 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ripk1Q60855 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ripk1Q60855 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ripk1Q60855 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.71■□□□□ 0.27
Ripk1Q60855 Gm38285-201ENSMUST00000192928 922 ntBASIC16.71■□□□□ 0.27
Ripk1Q60855 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.71■□□□□ 0.27
Ripk1Q60855 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ripk1Q60855 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.71■□□□□ 0.27
Ripk1Q60855 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ripk1Q60855 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ripk1Q60855 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ripk1Q60855 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ripk1Q60855 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ripk1Q60855 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Ripk1Q60855 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ripk1Q60855 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Ripk1Q60855 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ripk1Q60855 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.71■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms