Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rc3h1Q4VGL6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rc3h1Q4VGL6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rc3h1Q4VGL6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Rc3h1Q4VGL6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rc3h1Q4VGL6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rc3h1Q4VGL6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rc3h1Q4VGL6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rc3h1Q4VGL6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rc3h1Q4VGL6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rc3h1Q4VGL6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rc3h1Q4VGL6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rc3h1Q4VGL6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rc3h1Q4VGL6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Rc3h1Q4VGL6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rc3h1Q4VGL6 Gm13559-201ENSMUST00000120476 863 ntBASIC20.55■□□□□ 0.88
Rc3h1Q4VGL6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rc3h1Q4VGL6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rc3h1Q4VGL6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.55■□□□□ 0.88
Rc3h1Q4VGL6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rc3h1Q4VGL6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Rc3h1Q4VGL6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.55■□□□□ 0.88
Rc3h1Q4VGL6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rc3h1Q4VGL6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rc3h1Q4VGL6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.54■□□□□ 0.88
Rc3h1Q4VGL6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rc3h1Q4VGL6 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rc3h1Q4VGL6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rc3h1Q4VGL6 Gm6433-201ENSMUST00000118634 875 ntBASIC20.54■□□□□ 0.88
Rc3h1Q4VGL6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rc3h1Q4VGL6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.54■□□□□ 0.88
Rc3h1Q4VGL6 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.54■□□□□ 0.88
Rc3h1Q4VGL6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rc3h1Q4VGL6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rc3h1Q4VGL6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rc3h1Q4VGL6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rc3h1Q4VGL6 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.53■□□□□ 0.88
Rc3h1Q4VGL6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rc3h1Q4VGL6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Rc3h1Q4VGL6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Rc3h1Q4VGL6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rc3h1Q4VGL6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rc3h1Q4VGL6 Gm7977-201ENSMUST00000193787 748 ntBASIC20.53■□□□□ 0.88
Rc3h1Q4VGL6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rc3h1Q4VGL6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rc3h1Q4VGL6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rc3h1Q4VGL6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rc3h1Q4VGL6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rc3h1Q4VGL6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rc3h1Q4VGL6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rc3h1Q4VGL6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.53■□□□□ 0.88
Rc3h1Q4VGL6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.53■□□□□ 0.88
Rc3h1Q4VGL6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rc3h1Q4VGL6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rc3h1Q4VGL6 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rc3h1Q4VGL6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rc3h1Q4VGL6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Rc3h1Q4VGL6 Gm4974-201ENSMUST00000209974 875 ntBASIC20.52■□□□□ 0.88
Rc3h1Q4VGL6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rc3h1Q4VGL6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rc3h1Q4VGL6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.52■□□□□ 0.88
Rc3h1Q4VGL6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.52■□□□□ 0.88
Rc3h1Q4VGL6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rc3h1Q4VGL6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rc3h1Q4VGL6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rc3h1Q4VGL6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rc3h1Q4VGL6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rc3h1Q4VGL6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rc3h1Q4VGL6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.51■□□□□ 0.87
Rc3h1Q4VGL6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.51■□□□□ 0.87
Rc3h1Q4VGL6 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.51■□□□□ 0.87
Rc3h1Q4VGL6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rc3h1Q4VGL6 Gm29791-202ENSMUST00000207888 369 ntBASIC20.51■□□□□ 0.87
Rc3h1Q4VGL6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.51■□□□□ 0.87
Rc3h1Q4VGL6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.51■□□□□ 0.87
Rc3h1Q4VGL6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rc3h1Q4VGL6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rc3h1Q4VGL6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rc3h1Q4VGL6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rc3h1Q4VGL6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rc3h1Q4VGL6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rc3h1Q4VGL6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Rc3h1Q4VGL6 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rc3h1Q4VGL6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rc3h1Q4VGL6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rc3h1Q4VGL6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rc3h1Q4VGL6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rc3h1Q4VGL6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rc3h1Q4VGL6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rc3h1Q4VGL6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rc3h1Q4VGL6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rc3h1Q4VGL6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Rc3h1Q4VGL6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rc3h1Q4VGL6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rc3h1Q4VGL6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Rc3h1Q4VGL6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rc3h1Q4VGL6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rc3h1Q4VGL6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rc3h1Q4VGL6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rc3h1Q4VGL6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms