Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim63Q38HM4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trim63Q38HM4 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim63Q38HM4 AA386476-201ENSMUST00000098781 1665 ntBASIC14.77□□□□□ -0.04
Trim63Q38HM4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim63Q38HM4 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim63Q38HM4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim63Q38HM4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim63Q38HM4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim63Q38HM4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.77□□□□□ -0.04
Trim63Q38HM4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trim63Q38HM4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trim63Q38HM4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim63Q38HM4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trim63Q38HM4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC14.77□□□□□ -0.05
Trim63Q38HM4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim63Q38HM4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trim63Q38HM4 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim63Q38HM4 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim63Q38HM4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim63Q38HM4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim63Q38HM4 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim63Q38HM4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim63Q38HM4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim63Q38HM4 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim63Q38HM4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim63Q38HM4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim63Q38HM4 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim63Q38HM4 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim63Q38HM4 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim63Q38HM4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim63Q38HM4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim63Q38HM4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC14.76□□□□□ -0.05
Trim63Q38HM4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim63Q38HM4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim63Q38HM4 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim63Q38HM4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trim63Q38HM4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim63Q38HM4 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim63Q38HM4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim63Q38HM4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trim63Q38HM4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim63Q38HM4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim63Q38HM4 Gm11847-201ENSMUST00000125165 1119 ntBASIC14.75□□□□□ -0.05
Trim63Q38HM4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Trim63Q38HM4 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim63Q38HM4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Trim63Q38HM4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim63Q38HM4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim63Q38HM4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim63Q38HM4 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim63Q38HM4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Trim63Q38HM4 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim63Q38HM4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim63Q38HM4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Trim63Q38HM4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim63Q38HM4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim63Q38HM4 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim63Q38HM4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim63Q38HM4 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim63Q38HM4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim63Q38HM4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim63Q38HM4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim63Q38HM4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim63Q38HM4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim63Q38HM4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim63Q38HM4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim63Q38HM4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Trim63Q38HM4 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trim63Q38HM4 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Trim63Q38HM4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.74□□□□□ -0.05
Trim63Q38HM4 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim63Q38HM4 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Trim63Q38HM4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim63Q38HM4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim63Q38HM4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
Trim63Q38HM4 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim63Q38HM4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim63Q38HM4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim63Q38HM4 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim63Q38HM4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim63Q38HM4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim63Q38HM4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim63Q38HM4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim63Q38HM4 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.73□□□□□ -0.05
Trim63Q38HM4 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim63Q38HM4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trim63Q38HM4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim63Q38HM4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms