Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Cks1bP61025 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cks1bP61025 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cks1bP61025 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cks1bP61025 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC12.66□□□□□ -0.38
Cks1bP61025 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks1bP61025 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks1bP61025 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks1bP61025 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cks1bP61025 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks1bP61025 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks1bP61025 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks1bP61025 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks1bP61025 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cks1bP61025 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Cks1bP61025 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks1bP61025 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks1bP61025 Gm9959-201ENSMUST00000068277 390 ntBASIC12.66□□□□□ -0.38
Cks1bP61025 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cks1bP61025 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks1bP61025 Dmtn-210ENSMUST00000228824 2377 ntBASIC12.66□□□□□ -0.38
Cks1bP61025 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks1bP61025 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks1bP61025 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks1bP61025 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cks1bP61025 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cks1bP61025 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cks1bP61025 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cks1bP61025 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Cks1bP61025 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cks1bP61025 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cks1bP61025 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cks1bP61025 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC12.65□□□□□ -0.38
Cks1bP61025 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cks1bP61025 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cks1bP61025 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cks1bP61025 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cks1bP61025 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC12.65□□□□□ -0.38
Cks1bP61025 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cks1bP61025 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cks1bP61025 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cks1bP61025 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cks1bP61025 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cks1bP61025 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cks1bP61025 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cks1bP61025 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cks1bP61025 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC12.65□□□□□ -0.38
Cks1bP61025 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cks1bP61025 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cks1bP61025 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cks1bP61025 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cks1bP61025 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cks1bP61025 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC12.65□□□□□ -0.38
Cks1bP61025 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cks1bP61025 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.65□□□□□ -0.38
Cks1bP61025 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cks1bP61025 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Cks1bP61025 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cks1bP61025 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cks1bP61025 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cks1bP61025 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cks1bP61025 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cks1bP61025 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC12.64□□□□□ -0.39
Cks1bP61025 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cks1bP61025 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cks1bP61025 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cks1bP61025 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cks1bP61025 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cks1bP61025 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC12.64□□□□□ -0.39
Cks1bP61025 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cks1bP61025 Serp2-204ENSMUST00000228055 705 ntBASIC12.64□□□□□ -0.39
Cks1bP61025 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cks1bP61025 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cks1bP61025 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cks1bP61025 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cks1bP61025 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cks1bP61025 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.64□□□□□ -0.39
Cks1bP61025 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cks1bP61025 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cks1bP61025 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cks1bP61025 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cks1bP61025 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cks1bP61025 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cks1bP61025 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cks1bP61025 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cks1bP61025 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cks1bP61025 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cks1bP61025 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cks1bP61025 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC12.63□□□□□ -0.39
Cks1bP61025 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cks1bP61025 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cks1bP61025 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cks1bP61025 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cks1bP61025 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cks1bP61025 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cks1bP61025 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cks1bP61025 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cks1bP61025 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cks1bP61025 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms