Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tubgcp3P58854 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tubgcp3P58854 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tubgcp3P58854 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tubgcp3P58854 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tubgcp3P58854 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tubgcp3P58854 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Tubgcp3P58854 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tubgcp3P58854 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Tubgcp3P58854 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tubgcp3P58854 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tubgcp3P58854 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Tubgcp3P58854 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tubgcp3P58854 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.13■□□□□ 0.49
Tubgcp3P58854 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tubgcp3P58854 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Tubgcp3P58854 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tubgcp3P58854 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tubgcp3P58854 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tubgcp3P58854 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tubgcp3P58854 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tubgcp3P58854 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tubgcp3P58854 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.13■□□□□ 0.49
Tubgcp3P58854 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tubgcp3P58854 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tubgcp3P58854 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tubgcp3P58854 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Tubgcp3P58854 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Tubgcp3P58854 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tubgcp3P58854 Gm38285-201ENSMUST00000192928 922 ntBASIC18.12■□□□□ 0.49
Tubgcp3P58854 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Tubgcp3P58854 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.12■□□□□ 0.49
Tubgcp3P58854 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tubgcp3P58854 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tubgcp3P58854 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tubgcp3P58854 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.12■□□□□ 0.49
Tubgcp3P58854 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tubgcp3P58854 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.12■□□□□ 0.49
Tubgcp3P58854 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tubgcp3P58854 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tubgcp3P58854 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Tubgcp3P58854 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tubgcp3P58854 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tubgcp3P58854 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tubgcp3P58854 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.11■□□□□ 0.49
Tubgcp3P58854 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tubgcp3P58854 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tubgcp3P58854 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tubgcp3P58854 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Tubgcp3P58854 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.11■□□□□ 0.49
Tubgcp3P58854 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Tubgcp3P58854 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Tubgcp3P58854 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tubgcp3P58854 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tubgcp3P58854 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tubgcp3P58854 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.11■□□□□ 0.49
Tubgcp3P58854 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.11■□□□□ 0.49
Tubgcp3P58854 Gm10602-201ENSMUST00000098239 609 ntBASIC18.11■□□□□ 0.49
Tubgcp3P58854 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Tubgcp3P58854 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tubgcp3P58854 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tubgcp3P58854 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tubgcp3P58854 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tubgcp3P58854 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.11■□□□□ 0.49
Tubgcp3P58854 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tubgcp3P58854 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Tubgcp3P58854 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Tubgcp3P58854 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Tubgcp3P58854 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tubgcp3P58854 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Tubgcp3P58854 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tubgcp3P58854 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.1■□□□□ 0.49
Tubgcp3P58854 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.1■□□□□ 0.49
Tubgcp3P58854 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.1■□□□□ 0.49
Tubgcp3P58854 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.1■□□□□ 0.49
Tubgcp3P58854 Zfp783-201ENSMUST00000095946 670 ntBASIC18.1■□□□□ 0.49
Tubgcp3P58854 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tubgcp3P58854 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tubgcp3P58854 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tubgcp3P58854 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tubgcp3P58854 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tubgcp3P58854 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tubgcp3P58854 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tubgcp3P58854 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tubgcp3P58854 Flg-201ENSMUST00000050758 1488 ntBASIC18.09■□□□□ 0.49
Tubgcp3P58854 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tubgcp3P58854 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tubgcp3P58854 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Tubgcp3P58854 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Tubgcp3P58854 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tubgcp3P58854 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tubgcp3P58854 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Tubgcp3P58854 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Tubgcp3P58854 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.09■□□□□ 0.49
Tubgcp3P58854 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.09■□□□□ 0.49
Tubgcp3P58854 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.09■□□□□ 0.49
Tubgcp3P58854 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.09■□□□□ 0.49
Tubgcp3P58854 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.09■□□□□ 0.49
Tubgcp3P58854 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tubgcp3P58854 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms