Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
Sssca1P56873 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sssca1P56873 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sssca1P56873 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sssca1P56873 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sssca1P56873 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sssca1P56873 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sssca1P56873 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sssca1P56873 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sssca1P56873 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sssca1P56873 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Sssca1P56873 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sssca1P56873 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sssca1P56873 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sssca1P56873 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.38□□□□□ -0.11
Sssca1P56873 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.38□□□□□ -0.11
Sssca1P56873 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Sssca1P56873 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Sssca1P56873 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sssca1P56873 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sssca1P56873 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sssca1P56873 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sssca1P56873 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.38□□□□□ -0.11
Sssca1P56873 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sssca1P56873 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sssca1P56873 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sssca1P56873 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sssca1P56873 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sssca1P56873 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sssca1P56873 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sssca1P56873 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sssca1P56873 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sssca1P56873 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sssca1P56873 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sssca1P56873 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sssca1P56873 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sssca1P56873 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sssca1P56873 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sssca1P56873 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sssca1P56873 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sssca1P56873 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sssca1P56873 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Sssca1P56873 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.36□□□□□ -0.11
Sssca1P56873 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Sssca1P56873 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sssca1P56873 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sssca1P56873 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sssca1P56873 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Sssca1P56873 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sssca1P56873 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sssca1P56873 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sssca1P56873 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sssca1P56873 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sssca1P56873 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sssca1P56873 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sssca1P56873 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sssca1P56873 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sssca1P56873 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Sssca1P56873 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sssca1P56873 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sssca1P56873 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sssca1P56873 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sssca1P56873 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sssca1P56873 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sssca1P56873 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sssca1P56873 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sssca1P56873 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.35□□□□□ -0.11
Sssca1P56873 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sssca1P56873 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.35□□□□□ -0.11
Sssca1P56873 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.35□□□□□ -0.11
Sssca1P56873 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sssca1P56873 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.35□□□□□ -0.11
Sssca1P56873 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Sssca1P56873 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.35□□□□□ -0.11
Sssca1P56873 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Sssca1P56873 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sssca1P56873 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sssca1P56873 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sssca1P56873 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sssca1P56873 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sssca1P56873 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sssca1P56873 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sssca1P56873 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sssca1P56873 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sssca1P56873 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sssca1P56873 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.35□□□□□ -0.11
Sssca1P56873 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sssca1P56873 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sssca1P56873 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sssca1P56873 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sssca1P56873 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sssca1P56873 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sssca1P56873 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sssca1P56873 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sssca1P56873 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sssca1P56873 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
Sssca1P56873 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.34□□□□□ -0.11
Sssca1P56873 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sssca1P56873 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sssca1P56873 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms