Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lim2P56563 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.75■□□□□ 0.43
Lim2P56563 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lim2P56563 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lim2P56563 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Lim2P56563 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lim2P56563 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.74■□□□□ 0.43
Lim2P56563 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.74■□□□□ 0.43
Lim2P56563 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lim2P56563 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.74■□□□□ 0.43
Lim2P56563 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Lim2P56563 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.74■□□□□ 0.43
Lim2P56563 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.74■□□□□ 0.43
Lim2P56563 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lim2P56563 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lim2P56563 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lim2P56563 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lim2P56563 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Lim2P56563 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Lim2P56563 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lim2P56563 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lim2P56563 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lim2P56563 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lim2P56563 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lim2P56563 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lim2P56563 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lim2P56563 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lim2P56563 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.73■□□□□ 0.43
Lim2P56563 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lim2P56563 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lim2P56563 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lim2P56563 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lim2P56563 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lim2P56563 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lim2P56563 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lim2P56563 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lim2P56563 Gm10698-201ENSMUST00000182663 604 ntBASIC17.72■□□□□ 0.43
Lim2P56563 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.72■□□□□ 0.43
Lim2P56563 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.72■□□□□ 0.43
Lim2P56563 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lim2P56563 Gm10812-201ENSMUST00000099864 546 ntBASIC17.72■□□□□ 0.43
Lim2P56563 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Lim2P56563 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.72■□□□□ 0.43
Lim2P56563 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Lim2P56563 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lim2P56563 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Lim2P56563 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lim2P56563 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lim2P56563 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.71■□□□□ 0.43
Lim2P56563 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lim2P56563 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lim2P56563 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lim2P56563 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.71■□□□□ 0.43
Lim2P56563 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lim2P56563 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Lim2P56563 Gm15375-201ENSMUST00000119510 849 ntBASIC17.71■□□□□ 0.43
Lim2P56563 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.71■□□□□ 0.43
Lim2P56563 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Lim2P56563 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lim2P56563 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lim2P56563 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lim2P56563 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Lim2P56563 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Lim2P56563 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Lim2P56563 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.7■□□□□ 0.42
Lim2P56563 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.7■□□□□ 0.42
Lim2P56563 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lim2P56563 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Lim2P56563 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lim2P56563 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lim2P56563 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lim2P56563 Gm15378-201ENSMUST00000121894 207 ntBASIC17.7■□□□□ 0.42
Lim2P56563 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Lim2P56563 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.7■□□□□ 0.42
Lim2P56563 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lim2P56563 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lim2P56563 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lim2P56563 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Lim2P56563 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lim2P56563 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.69■□□□□ 0.42
Lim2P56563 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lim2P56563 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lim2P56563 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lim2P56563 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.69■□□□□ 0.42
Lim2P56563 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lim2P56563 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lim2P56563 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lim2P56563 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.69■□□□□ 0.42
Lim2P56563 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
Lim2P56563 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lim2P56563 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lim2P56563 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lim2P56563 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lim2P56563 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Lim2P56563 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lim2P56563 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lim2P56563 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Lim2P56563 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lim2P56563 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Lim2P56563 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms