Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nub1P54729 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nub1P54729 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nub1P54729 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.11■□□□□ 0.65
Nub1P54729 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nub1P54729 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Nub1P54729 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nub1P54729 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nub1P54729 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Nub1P54729 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nub1P54729 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nub1P54729 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nub1P54729 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Nub1P54729 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nub1P54729 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nub1P54729 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.1■□□□□ 0.65
Nub1P54729 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.1■□□□□ 0.65
Nub1P54729 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nub1P54729 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nub1P54729 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Nub1P54729 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nub1P54729 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nub1P54729 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nub1P54729 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.09■□□□□ 0.65
Nub1P54729 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Nub1P54729 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Nub1P54729 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.09■□□□□ 0.65
Nub1P54729 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nub1P54729 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nub1P54729 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.09■□□□□ 0.65
Nub1P54729 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nub1P54729 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Nub1P54729 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nub1P54729 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nub1P54729 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nub1P54729 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nub1P54729 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nub1P54729 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.08■□□□□ 0.64
Nub1P54729 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.08■□□□□ 0.64
Nub1P54729 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.08■□□□□ 0.64
Nub1P54729 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nub1P54729 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nub1P54729 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nub1P54729 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Nub1P54729 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Nub1P54729 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nub1P54729 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nub1P54729 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nub1P54729 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nub1P54729 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Nub1P54729 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nub1P54729 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.07■□□□□ 0.64
Nub1P54729 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nub1P54729 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Nub1P54729 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nub1P54729 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.06■□□□□ 0.64
Nub1P54729 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nub1P54729 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.06■□□□□ 0.64
Nub1P54729 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.06■□□□□ 0.64
Nub1P54729 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nub1P54729 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Nub1P54729 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nub1P54729 Gm13158-201ENSMUST00000122007 736 ntBASIC19.06■□□□□ 0.64
Nub1P54729 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nub1P54729 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.06■□□□□ 0.64
Nub1P54729 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Nub1P54729 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nub1P54729 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nub1P54729 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nub1P54729 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nub1P54729 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nub1P54729 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.05■□□□□ 0.64
Nub1P54729 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nub1P54729 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.05■□□□□ 0.64
Nub1P54729 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nub1P54729 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nub1P54729 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nub1P54729 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Nub1P54729 Gm20760-201ENSMUST00000179197 648 ntBASIC19.05■□□□□ 0.64
Nub1P54729 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nub1P54729 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nub1P54729 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Nub1P54729 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nub1P54729 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.05■□□□□ 0.64
Nub1P54729 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nub1P54729 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nub1P54729 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.05■□□□□ 0.64
Nub1P54729 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.05■□□□□ 0.64
Nub1P54729 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nub1P54729 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nub1P54729 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nub1P54729 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nub1P54729 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Nub1P54729 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nub1P54729 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nub1P54729 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Nub1P54729 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nub1P54729 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Nub1P54729 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Nub1P54729 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms