Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hist1h1aP43275 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hist1h1aP43275 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hist1h1aP43275 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hist1h1aP43275 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Hist1h1aP43275 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hist1h1aP43275 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hist1h1aP43275 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hist1h1aP43275 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hist1h1aP43275 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hist1h1aP43275 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hist1h1aP43275 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hist1h1aP43275 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Hist1h1aP43275 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Hist1h1aP43275 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hist1h1aP43275 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.67□□□□□ -0.06
Hist1h1aP43275 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hist1h1aP43275 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hist1h1aP43275 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hist1h1aP43275 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hist1h1aP43275 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hist1h1aP43275 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hist1h1aP43275 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hist1h1aP43275 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hist1h1aP43275 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hist1h1aP43275 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hist1h1aP43275 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Hist1h1aP43275 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hist1h1aP43275 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hist1h1aP43275 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.67□□□□□ -0.06
Hist1h1aP43275 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hist1h1aP43275 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.66□□□□□ -0.06
Hist1h1aP43275 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hist1h1aP43275 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hist1h1aP43275 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hist1h1aP43275 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hist1h1aP43275 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hist1h1aP43275 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.66□□□□□ -0.06
Hist1h1aP43275 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Hist1h1aP43275 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hist1h1aP43275 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hist1h1aP43275 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hist1h1aP43275 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Hist1h1aP43275 Gm13234-201ENSMUST00000120010 747 ntBASIC14.66□□□□□ -0.06
Hist1h1aP43275 Gm13534-201ENSMUST00000121169 513 ntBASIC14.66□□□□□ -0.06
Hist1h1aP43275 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hist1h1aP43275 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Hist1h1aP43275 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Hist1h1aP43275 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hist1h1aP43275 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hist1h1aP43275 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.66□□□□□ -0.06
Hist1h1aP43275 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Hist1h1aP43275 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist1h1aP43275 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist1h1aP43275 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist1h1aP43275 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist1h1aP43275 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Hist1h1aP43275 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist1h1aP43275 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Hist1h1aP43275 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.65□□□□□ -0.06
Hist1h1aP43275 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist1h1aP43275 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist1h1aP43275 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist1h1aP43275 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Hist1h1aP43275 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist1h1aP43275 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Hist1h1aP43275 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Hist1h1aP43275 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Hist1h1aP43275 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h1aP43275 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Hist1h1aP43275 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Hist1h1aP43275 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h1aP43275 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Hist1h1aP43275 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h1aP43275 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h1aP43275 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h1aP43275 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h1aP43275 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.64□□□□□ -0.07
Hist1h1aP43275 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.64□□□□□ -0.07
Hist1h1aP43275 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h1aP43275 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h1aP43275 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h1aP43275 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h1aP43275 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Hist1h1aP43275 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h1aP43275 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist1h1aP43275 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist1h1aP43275 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist1h1aP43275 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.63□□□□□ -0.07
Hist1h1aP43275 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Hist1h1aP43275 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist1h1aP43275 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist1h1aP43275 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.63□□□□□ -0.07
Hist1h1aP43275 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist1h1aP43275 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist1h1aP43275 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Hist1h1aP43275 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist1h1aP43275 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist1h1aP43275 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.63□□□□□ -0.07
Hist1h1aP43275 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms