Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.41■□□□□ 0.22
Thbs1P35441 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Thbs1P35441 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Thbs1P35441 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thbs1P35441 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thbs1P35441 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thbs1P35441 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thbs1P35441 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thbs1P35441 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thbs1P35441 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thbs1P35441 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thbs1P35441 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thbs1P35441 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Thbs1P35441 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Thbs1P35441 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Thbs1P35441 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.4■□□□□ 0.22
Thbs1P35441 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Thbs1P35441 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Thbs1P35441 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Thbs1P35441 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Thbs1P35441 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Thbs1P35441 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Thbs1P35441 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Thbs1P35441 Gm12441-201ENSMUST00000121806 588 ntBASIC16.4■□□□□ 0.22
Thbs1P35441 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Thbs1P35441 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Thbs1P35441 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Thbs1P35441 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Thbs1P35441 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Thbs1P35441 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Thbs1P35441 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.39■□□□□ 0.22
Thbs1P35441 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Thbs1P35441 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Thbs1P35441 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Thbs1P35441 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Thbs1P35441 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Thbs1P35441 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.39■□□□□ 0.21
Thbs1P35441 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Thbs1P35441 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Thbs1P35441 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Thbs1P35441 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.39■□□□□ 0.21
Thbs1P35441 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Thbs1P35441 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Thbs1P35441 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Thbs1P35441 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Thbs1P35441 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Thbs1P35441 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Thbs1P35441 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Thbs1P35441 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Thbs1P35441 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Thbs1P35441 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Thbs1P35441 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Thbs1P35441 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Thbs1P35441 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Thbs1P35441 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Thbs1P35441 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.38■□□□□ 0.21
Thbs1P35441 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.38■□□□□ 0.21
Thbs1P35441 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.38■□□□□ 0.21
Thbs1P35441 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Thbs1P35441 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.38■□□□□ 0.21
Thbs1P35441 Gm29791-202ENSMUST00000207888 369 ntBASIC16.38■□□□□ 0.21
Thbs1P35441 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Thbs1P35441 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Thbs1P35441 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Thbs1P35441 Gm4968-201ENSMUST00000071458 858 ntBASIC16.38■□□□□ 0.21
Thbs1P35441 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Thbs1P35441 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Thbs1P35441 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Thbs1P35441 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Thbs1P35441 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Thbs1P35441 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Thbs1P35441 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Thbs1P35441 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Thbs1P35441 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Thbs1P35441 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.37■□□□□ 0.21
Thbs1P35441 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Thbs1P35441 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Thbs1P35441 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Thbs1P35441 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Thbs1P35441 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Thbs1P35441 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Thbs1P35441 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Thbs1P35441 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Thbs1P35441 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Thbs1P35441 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.37■□□□□ 0.21
Thbs1P35441 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.37■□□□□ 0.21
Thbs1P35441 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Thbs1P35441 Gm5408-201ENSMUST00000197998 747 ntBASIC16.37■□□□□ 0.21
Thbs1P35441 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.37■□□□□ 0.21
Thbs1P35441 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Thbs1P35441 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.37■□□□□ 0.21
Thbs1P35441 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Thbs1P35441 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.37■□□□□ 0.21
Thbs1P35441 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Thbs1P35441 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Thbs1P35441 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Thbs1P35441 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Thbs1P35441 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Thbs1P35441 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Thbs1P35441 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms