Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RxrbP28704 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RxrbP28704 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RxrbP28704 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.86■□□□□ 0.45
RxrbP28704 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RxrbP28704 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.86■□□□□ 0.45
RxrbP28704 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.86■□□□□ 0.45
RxrbP28704 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RxrbP28704 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RxrbP28704 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RxrbP28704 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RxrbP28704 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.86■□□□□ 0.45
RxrbP28704 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RxrbP28704 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RxrbP28704 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RxrbP28704 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RxrbP28704 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RxrbP28704 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RxrbP28704 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RxrbP28704 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RxrbP28704 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RxrbP28704 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RxrbP28704 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RxrbP28704 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RxrbP28704 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RxrbP28704 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.85■□□□□ 0.45
RxrbP28704 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RxrbP28704 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.85■□□□□ 0.45
RxrbP28704 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.85■□□□□ 0.45
RxrbP28704 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RxrbP28704 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.85■□□□□ 0.45
RxrbP28704 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RxrbP28704 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RxrbP28704 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RxrbP28704 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RxrbP28704 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RxrbP28704 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RxrbP28704 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RxrbP28704 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RxrbP28704 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RxrbP28704 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.84■□□□□ 0.45
RxrbP28704 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RxrbP28704 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RxrbP28704 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RxrbP28704 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RxrbP28704 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.84■□□□□ 0.45
RxrbP28704 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RxrbP28704 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RxrbP28704 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RxrbP28704 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
RxrbP28704 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RxrbP28704 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RxrbP28704 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RxrbP28704 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
RxrbP28704 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.84■□□□□ 0.45
RxrbP28704 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RxrbP28704 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RxrbP28704 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RxrbP28704 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RxrbP28704 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.83■□□□□ 0.45
RxrbP28704 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
RxrbP28704 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RxrbP28704 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RxrbP28704 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RxrbP28704 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RxrbP28704 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RxrbP28704 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
RxrbP28704 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RxrbP28704 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RxrbP28704 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
RxrbP28704 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RxrbP28704 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RxrbP28704 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RxrbP28704 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.83■□□□□ 0.44
RxrbP28704 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RxrbP28704 Gm9988-201ENSMUST00000069786 435 ntBASIC17.83■□□□□ 0.44
RxrbP28704 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RxrbP28704 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.83■□□□□ 0.44
RxrbP28704 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RxrbP28704 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RxrbP28704 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RxrbP28704 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RxrbP28704 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RxrbP28704 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RxrbP28704 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.82■□□□□ 0.44
RxrbP28704 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RxrbP28704 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.82■□□□□ 0.44
RxrbP28704 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
RxrbP28704 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
RxrbP28704 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RxrbP28704 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RxrbP28704 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RxrbP28704 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RxrbP28704 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RxrbP28704 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RxrbP28704 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RxrbP28704 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RxrbP28704 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RxrbP28704 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.81■□□□□ 0.44
RxrbP28704 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms