Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BdnfP21237 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BdnfP21237 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
BdnfP21237 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
BdnfP21237 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
BdnfP21237 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BdnfP21237 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
BdnfP21237 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
BdnfP21237 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17■□□□□ 0.31
BdnfP21237 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BdnfP21237 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
BdnfP21237 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17■□□□□ 0.31
BdnfP21237 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
BdnfP21237 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
BdnfP21237 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BdnfP21237 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17■□□□□ 0.31
BdnfP21237 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BdnfP21237 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17■□□□□ 0.31
BdnfP21237 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
BdnfP21237 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BdnfP21237 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BdnfP21237 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
BdnfP21237 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BdnfP21237 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.99■□□□□ 0.31
BdnfP21237 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
BdnfP21237 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BdnfP21237 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BdnfP21237 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
BdnfP21237 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
BdnfP21237 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BdnfP21237 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BdnfP21237 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BdnfP21237 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BdnfP21237 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BdnfP21237 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BdnfP21237 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BdnfP21237 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BdnfP21237 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.98■□□□□ 0.31
BdnfP21237 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
BdnfP21237 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.98■□□□□ 0.31
BdnfP21237 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.98■□□□□ 0.31
BdnfP21237 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BdnfP21237 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
BdnfP21237 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BdnfP21237 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BdnfP21237 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.97■□□□□ 0.31
BdnfP21237 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BdnfP21237 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BdnfP21237 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
BdnfP21237 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BdnfP21237 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BdnfP21237 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.97■□□□□ 0.31
BdnfP21237 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BdnfP21237 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
BdnfP21237 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BdnfP21237 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BdnfP21237 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BdnfP21237 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BdnfP21237 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.97■□□□□ 0.31
BdnfP21237 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.97■□□□□ 0.31
BdnfP21237 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BdnfP21237 Idnk-204ENSMUST00000226010 1898 ntBASIC16.97■□□□□ 0.31
BdnfP21237 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BdnfP21237 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.97■□□□□ 0.31
BdnfP21237 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BdnfP21237 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BdnfP21237 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
BdnfP21237 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BdnfP21237 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BdnfP21237 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BdnfP21237 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BdnfP21237 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BdnfP21237 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BdnfP21237 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
BdnfP21237 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.96■□□□□ 0.31
BdnfP21237 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.96■□□□□ 0.31
BdnfP21237 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
BdnfP21237 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BdnfP21237 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BdnfP21237 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
BdnfP21237 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
BdnfP21237 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
BdnfP21237 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
BdnfP21237 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
BdnfP21237 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
BdnfP21237 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.95■□□□□ 0.3
BdnfP21237 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BdnfP21237 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BdnfP21237 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.95■□□□□ 0.3
BdnfP21237 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BdnfP21237 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
BdnfP21237 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BdnfP21237 AV356131-201ENSMUST00000206201 750 ntBASIC16.95■□□□□ 0.3
BdnfP21237 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BdnfP21237 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BdnfP21237 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BdnfP21237 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BdnfP21237 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.95■□□□□ 0.3
BdnfP21237 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.95■□□□□ 0.3
BdnfP21237 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms