Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Gm10138-203ENSMUST00000206952 366 ntBASIC17.05■□□□□ 0.32
Hoxb9P20615 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxb9P20615 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxb9P20615 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.05■□□□□ 0.32
Hoxb9P20615 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hoxb9P20615 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxb9P20615 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Hoxb9P20615 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
Hoxb9P20615 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxb9P20615 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxb9P20615 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxb9P20615 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxb9P20615 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxb9P20615 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxb9P20615 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxb9P20615 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxb9P20615 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxb9P20615 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxb9P20615 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxb9P20615 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxb9P20615 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.04■□□□□ 0.32
Hoxb9P20615 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxb9P20615 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxb9P20615 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Hoxb9P20615 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.04■□□□□ 0.32
Hoxb9P20615 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.04■□□□□ 0.32
Hoxb9P20615 Mir6349-201ENSMUST00000184059 97 ntBASIC17.04■□□□□ 0.32
Hoxb9P20615 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.04■□□□□ 0.32
Hoxb9P20615 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxb9P20615 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxb9P20615 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Hoxb9P20615 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Hoxb9P20615 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxb9P20615 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxb9P20615 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxb9P20615 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxb9P20615 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxb9P20615 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxb9P20615 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxb9P20615 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxb9P20615 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.03■□□□□ 0.32
Hoxb9P20615 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxb9P20615 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
Hoxb9P20615 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxb9P20615 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Hoxb9P20615 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxb9P20615 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxb9P20615 Gm13401-201ENSMUST00000117074 291 ntBASIC17.03■□□□□ 0.32
Hoxb9P20615 Gm15375-201ENSMUST00000119510 849 ntBASIC17.03■□□□□ 0.32
Hoxb9P20615 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.03■□□□□ 0.32
Hoxb9P20615 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxb9P20615 Mir8112-201ENSMUST00000184382 131 ntBASIC17.03■□□□□ 0.32
Hoxb9P20615 Gm37856-201ENSMUST00000191634 999 ntBASIC17.03■□□□□ 0.32
Hoxb9P20615 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Hoxb9P20615 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxb9P20615 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxb9P20615 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.03■□□□□ 0.32
Hoxb9P20615 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.03■□□□□ 0.32
Hoxb9P20615 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Hoxb9P20615 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxb9P20615 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxb9P20615 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxb9P20615 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Hoxb9P20615 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxb9P20615 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.03■□□□□ 0.32
Hoxb9P20615 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxb9P20615 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Hoxb9P20615 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxb9P20615 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxb9P20615 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Hoxb9P20615 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxb9P20615 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxb9P20615 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxb9P20615 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxb9P20615 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.02■□□□□ 0.32
Hoxb9P20615 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxb9P20615 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxb9P20615 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.02■□□□□ 0.31
Hoxb9P20615 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hoxb9P20615 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hoxb9P20615 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hoxb9P20615 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hoxb9P20615 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Hoxb9P20615 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.01■□□□□ 0.31
Hoxb9P20615 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxb9P20615 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxb9P20615 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxb9P20615 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxb9P20615 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxb9P20615 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxb9P20615 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxb9P20615 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.01■□□□□ 0.31
Hoxb9P20615 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxb9P20615 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxb9P20615 Gm10418-201ENSMUST00000100943 576 ntBASIC17.01■□□□□ 0.31
Hoxb9P20615 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.01■□□□□ 0.31
Hoxb9P20615 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxb9P20615 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.01■□□□□ 0.31
Hoxb9P20615 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.01■□□□□ 0.31
Hoxb9P20615 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms