Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm10517-202ENSMUST00000192970 758 ntBASIC17.47■□□□□ 0.39
Hoxa4P06798 Gm8969-201ENSMUST00000199694 526 ntBASIC17.47■□□□□ 0.39
Hoxa4P06798 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxa4P06798 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxa4P06798 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Hoxa4P06798 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxa4P06798 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Hoxa4P06798 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxa4P06798 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Hoxa4P06798 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.47■□□□□ 0.39
Hoxa4P06798 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxa4P06798 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Hoxa4P06798 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.47■□□□□ 0.39
Hoxa4P06798 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxa4P06798 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxa4P06798 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxa4P06798 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxa4P06798 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxa4P06798 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxa4P06798 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.46■□□□□ 0.39
Hoxa4P06798 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.46■□□□□ 0.39
Hoxa4P06798 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxa4P06798 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.46■□□□□ 0.39
Hoxa4P06798 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Hoxa4P06798 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxa4P06798 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxa4P06798 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxa4P06798 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxa4P06798 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxa4P06798 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxa4P06798 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxa4P06798 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxa4P06798 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxa4P06798 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.46■□□□□ 0.39
Hoxa4P06798 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Hoxa4P06798 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.45■□□□□ 0.38
Hoxa4P06798 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxa4P06798 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxa4P06798 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxa4P06798 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.45■□□□□ 0.38
Hoxa4P06798 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxa4P06798 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
Hoxa4P06798 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.45■□□□□ 0.38
Hoxa4P06798 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Hoxa4P06798 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Hoxa4P06798 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Hoxa4P06798 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa4P06798 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa4P06798 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa4P06798 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa4P06798 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa4P06798 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa4P06798 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa4P06798 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa4P06798 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa4P06798 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Hoxa4P06798 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa4P06798 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Hoxa4P06798 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa4P06798 Gm21814-202ENSMUST00000203277 873 ntBASIC17.44■□□□□ 0.38
Hoxa4P06798 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa4P06798 Odf3b-204ENSMUST00000227834 930 ntBASIC17.44■□□□□ 0.38
Hoxa4P06798 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa4P06798 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.44■□□□□ 0.38
Hoxa4P06798 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Hoxa4P06798 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa4P06798 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa4P06798 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa4P06798 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa4P06798 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa4P06798 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa4P06798 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa4P06798 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa4P06798 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa4P06798 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa4P06798 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.43■□□□□ 0.38
Hoxa4P06798 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.43■□□□□ 0.38
Hoxa4P06798 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.43■□□□□ 0.38
Hoxa4P06798 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Hoxa4P06798 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.43■□□□□ 0.38
Hoxa4P06798 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa4P06798 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Hoxa4P06798 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa4P06798 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa4P06798 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa4P06798 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Hoxa4P06798 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa4P06798 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa4P06798 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa4P06798 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.43■□□□□ 0.38
Hoxa4P06798 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxa4P06798 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxa4P06798 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.42■□□□□ 0.38
Hoxa4P06798 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Hoxa4P06798 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Hoxa4P06798 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxa4P06798 Grk6-206ENSMUST00000224995 2971 ntBASIC17.42■□□□□ 0.38
Hoxa4P06798 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.42■□□□□ 0.38
Hoxa4P06798 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxa4P06798 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms