Protein–RNA interactions for Protein: P01728

Ig lambda-2 chain V region, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01728 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
P01728 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01728 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01728 Gm13216-201ENSMUST00000117145 591 ntBASIC13.94□□□□□ -0.18
P01728 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
P01728 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.94□□□□□ -0.18
P01728 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
P01728 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.94□□□□□ -0.18
P01728 AC140930.3-201ENSMUST00000222935 274 ntBASIC13.94□□□□□ -0.18
P01728 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01728 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01728 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01728 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01728 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
P01728 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P01728 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
P01728 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P01728 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P01728 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01728 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01728 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01728 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01728 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
P01728 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.93□□□□□ -0.18
P01728 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
P01728 Dancr-204ENSMUST00000132389 2347 ntBASIC13.92□□□□□ -0.18
P01728 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01728 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01728 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
P01728 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
P01728 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
P01728 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
P01728 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01728 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
P01728 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01728 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
P01728 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01728 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
P01728 Gm21956-201ENSMUST00000179946 522 ntBASIC13.92□□□□□ -0.18
P01728 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
P01728 Gm13241-201ENSMUST00000094493 780 ntBASIC13.92□□□□□ -0.18
P01728 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01728 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01728 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
P01728 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC13.92□□□□□ -0.18
P01728 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
P01728 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01728 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01728 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01728 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01728 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01728 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01728 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.92□□□□□ -0.18
P01728 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P01728 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
P01728 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
P01728 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
P01728 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P01728 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P01728 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
P01728 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
P01728 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
P01728 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.91□□□□□ -0.18
P01728 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P01728 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
P01728 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P01728 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
P01728 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.91□□□□□ -0.18
P01728 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P01728 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P01728 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P01728 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P01728 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
P01728 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
P01728 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P01728 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
P01728 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P01728 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
P01728 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
P01728 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P01728 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P01728 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P01728 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P01728 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
P01728 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P01728 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P01728 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P01728 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P01728 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
P01728 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
P01728 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P01728 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
P01728 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
P01728 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.9□□□□□ -0.18
P01728 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P01728 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P01728 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P01728 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
P01728 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P01728 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms