Protein–RNA interactions for Protein: O88888

Apba3, Amyloid-beta A4 precursor protein-binding family A member 3, mousemouse

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apba3O88888 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Apba3O88888 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Apba3O88888 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Apba3O88888 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.44■□□□□ 0.7
Apba3O88888 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Apba3O88888 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Apba3O88888 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Apba3O88888 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apba3O88888 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Apba3O88888 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apba3O88888 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apba3O88888 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apba3O88888 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Apba3O88888 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apba3O88888 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.43■□□□□ 0.7
Apba3O88888 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Apba3O88888 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.43■□□□□ 0.7
Apba3O88888 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Apba3O88888 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apba3O88888 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apba3O88888 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apba3O88888 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apba3O88888 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apba3O88888 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apba3O88888 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apba3O88888 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apba3O88888 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Apba3O88888 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Apba3O88888 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apba3O88888 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apba3O88888 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apba3O88888 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Apba3O88888 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apba3O88888 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.42■□□□□ 0.7
Apba3O88888 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.42■□□□□ 0.7
Apba3O88888 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apba3O88888 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Apba3O88888 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Apba3O88888 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Apba3O88888 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Apba3O88888 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Apba3O88888 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Apba3O88888 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.41■□□□□ 0.7
Apba3O88888 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Apba3O88888 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.41■□□□□ 0.7
Apba3O88888 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.41■□□□□ 0.7
Apba3O88888 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Apba3O88888 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Apba3O88888 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Apba3O88888 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Apba3O88888 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Apba3O88888 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Apba3O88888 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Apba3O88888 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Apba3O88888 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Apba3O88888 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Apba3O88888 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Apba3O88888 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Apba3O88888 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Apba3O88888 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Apba3O88888 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Apba3O88888 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Apba3O88888 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Apba3O88888 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Apba3O88888 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Apba3O88888 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Apba3O88888 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Apba3O88888 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Apba3O88888 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Apba3O88888 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Apba3O88888 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Apba3O88888 Gm6433-201ENSMUST00000118634 875 ntBASIC19.4■□□□□ 0.7
Apba3O88888 Gm13559-201ENSMUST00000120476 863 ntBASIC19.4■□□□□ 0.7
Apba3O88888 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.4■□□□□ 0.7
Apba3O88888 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Apba3O88888 Gm7977-201ENSMUST00000193787 748 ntBASIC19.4■□□□□ 0.7
Apba3O88888 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.4■□□□□ 0.7
Apba3O88888 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Apba3O88888 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Apba3O88888 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.4■□□□□ 0.7
Apba3O88888 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Apba3O88888 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.39■□□□□ 0.7
Apba3O88888 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Apba3O88888 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Apba3O88888 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Apba3O88888 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Apba3O88888 Gm4974-201ENSMUST00000209974 875 ntBASIC19.39■□□□□ 0.69
Apba3O88888 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.39■□□□□ 0.69
Apba3O88888 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Apba3O88888 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Apba3O88888 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.39■□□□□ 0.69
Apba3O88888 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Apba3O88888 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Apba3O88888 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Apba3O88888 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.39■□□□□ 0.69
Apba3O88888 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.39■□□□□ 0.69
Apba3O88888 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.39■□□□□ 0.69
Apba3O88888 Grk6-206ENSMUST00000224995 2971 ntBASIC19.38■□□□□ 0.69
Apba3O88888 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Apba3O88888 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms