Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cldn1O88551 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.2■□□□□ 0.02
Cldn1O88551 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cldn1O88551 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldn1O88551 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldn1O88551 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldn1O88551 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldn1O88551 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldn1O88551 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cldn1O88551 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.2■□□□□ 0.02
Cldn1O88551 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldn1O88551 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldn1O88551 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldn1O88551 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldn1O88551 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cldn1O88551 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cldn1O88551 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldn1O88551 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldn1O88551 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldn1O88551 Gm9103-201ENSMUST00000119371 405 ntBASIC15.19■□□□□ 0.02
Cldn1O88551 Gm12382-201ENSMUST00000122005 922 ntBASIC15.19■□□□□ 0.02
Cldn1O88551 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cldn1O88551 Ank2-226ENSMUST00000189368 339 ntBASIC15.19■□□□□ 0.02
Cldn1O88551 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.19■□□□□ 0.02
Cldn1O88551 Gm18032-201ENSMUST00000222541 538 ntBASIC15.19■□□□□ 0.02
Cldn1O88551 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldn1O88551 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldn1O88551 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldn1O88551 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldn1O88551 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldn1O88551 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cldn1O88551 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldn1O88551 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldn1O88551 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Cldn1O88551 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldn1O88551 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldn1O88551 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cldn1O88551 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldn1O88551 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldn1O88551 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldn1O88551 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.18■□□□□ 0.02
Cldn1O88551 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldn1O88551 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cldn1O88551 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cldn1O88551 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.18■□□□□ 0.02
Cldn1O88551 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.18■□□□□ 0.02
Cldn1O88551 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cldn1O88551 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldn1O88551 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldn1O88551 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldn1O88551 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldn1O88551 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.17■□□□□ 0.02
Cldn1O88551 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldn1O88551 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cldn1O88551 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldn1O88551 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cldn1O88551 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.17■□□□□ 0.02
Cldn1O88551 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.17■□□□□ 0.02
Cldn1O88551 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Cldn1O88551 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
Cldn1O88551 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldn1O88551 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cldn1O88551 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldn1O88551 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldn1O88551 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cldn1O88551 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Cldn1O88551 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cldn1O88551 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cldn1O88551 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cldn1O88551 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cldn1O88551 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.16■□□□□ 0.02
Cldn1O88551 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Cldn1O88551 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cldn1O88551 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cldn1O88551 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cldn1O88551 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cldn1O88551 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cldn1O88551 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cldn1O88551 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cldn1O88551 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cldn1O88551 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cldn1O88551 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cldn1O88551 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cldn1O88551 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cldn1O88551 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cldn1O88551 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cldn1O88551 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Cldn1O88551 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cldn1O88551 Gm18101-201ENSMUST00000215769 548 ntBASIC15.15■□□□□ 0.02
Cldn1O88551 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cldn1O88551 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cldn1O88551 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cldn1O88551 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cldn1O88551 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cldn1O88551 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cldn1O88551 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cldn1O88551 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cldn1O88551 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cldn1O88551 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cldn1O88551 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms