Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.04■□□□□ -0
Cxcl13O55038 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cxcl13O55038 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cxcl13O55038 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cxcl13O55038 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cxcl13O55038 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cxcl13O55038 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl13O55038 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl13O55038 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl13O55038 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Cxcl13O55038 Gm13559-201ENSMUST00000120476 863 ntBASIC15.03■□□□□ -0
Cxcl13O55038 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.03■□□□□ -0
Cxcl13O55038 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.03■□□□□ -0
Cxcl13O55038 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl13O55038 Gm29791-202ENSMUST00000207888 369 ntBASIC15.03■□□□□ -0
Cxcl13O55038 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.03■□□□□ -0
Cxcl13O55038 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl13O55038 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl13O55038 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cxcl13O55038 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cxcl13O55038 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Cxcl13O55038 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.03■□□□□ -0
Cxcl13O55038 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl13O55038 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cxcl13O55038 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cxcl13O55038 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.02■□□□□ -0
Cxcl13O55038 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cxcl13O55038 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cxcl13O55038 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cxcl13O55038 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cxcl13O55038 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.02■□□□□ -0
Cxcl13O55038 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cxcl13O55038 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.02■□□□□ -0
Cxcl13O55038 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cxcl13O55038 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.02■□□□□ -0
Cxcl13O55038 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.02■□□□□ -0
Cxcl13O55038 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cxcl13O55038 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cxcl13O55038 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cxcl13O55038 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cxcl13O55038 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Cxcl13O55038 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Cxcl13O55038 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cxcl13O55038 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Cxcl13O55038 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cxcl13O55038 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cxcl13O55038 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Cxcl13O55038 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl13O55038 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cxcl13O55038 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cxcl13O55038 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl13O55038 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl13O55038 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cxcl13O55038 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl13O55038 Gm13401-201ENSMUST00000117074 291 ntBASIC15.01□□□□□ -0.01
Cxcl13O55038 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl13O55038 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl13O55038 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Cxcl13O55038 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl13O55038 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Cxcl13O55038 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl13O55038 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl13O55038 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl13O55038 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl13O55038 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.01□□□□□ -0.01
Cxcl13O55038 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl13O55038 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl13O55038 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cxcl13O55038 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl13O55038 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cxcl13O55038 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cxcl13O55038 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl13O55038 Gm38027-201ENSMUST00000192315 235 ntBASIC15□□□□□ -0.01
Cxcl13O55038 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15□□□□□ -0.01
Cxcl13O55038 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl13O55038 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl13O55038 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl13O55038 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl13O55038 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cxcl13O55038 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl13O55038 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15□□□□□ -0.01
Cxcl13O55038 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl13O55038 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl13O55038 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl13O55038 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl13O55038 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl13O55038 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl13O55038 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl13O55038 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl13O55038 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl13O55038 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl13O55038 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl13O55038 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl13O55038 Gm10231-201ENSMUST00000181584 441 ntBASIC14.99□□□□□ -0.01
Cxcl13O55038 Gm27463-201ENSMUST00000183569 57 ntBASIC14.99□□□□□ -0.01
Cxcl13O55038 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl13O55038 Gm10175-202ENSMUST00000208752 441 ntBASIC14.99□□□□□ -0.01
Cxcl13O55038 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl13O55038 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl13O55038 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms