Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1bO55017 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1bO55017 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cacna1bO55017 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1bO55017 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1bO55017 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1bO55017 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1bO55017 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.11■□□□□ 0.33
Cacna1bO55017 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1bO55017 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.1■□□□□ 0.33
Cacna1bO55017 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1bO55017 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1bO55017 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.1■□□□□ 0.33
Cacna1bO55017 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1bO55017 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cacna1bO55017 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.1■□□□□ 0.33
Cacna1bO55017 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cacna1bO55017 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1bO55017 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1bO55017 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1bO55017 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cacna1bO55017 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1bO55017 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Cacna1bO55017 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1bO55017 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1bO55017 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1bO55017 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1bO55017 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1bO55017 Golph3-205ENSMUST00000228671 2842 ntBASIC17.1■□□□□ 0.33
Cacna1bO55017 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1bO55017 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cacna1bO55017 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.09■□□□□ 0.33
Cacna1bO55017 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1bO55017 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1bO55017 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1bO55017 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1bO55017 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1bO55017 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.09■□□□□ 0.33
Cacna1bO55017 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.09■□□□□ 0.33
Cacna1bO55017 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1bO55017 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cacna1bO55017 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.09■□□□□ 0.33
Cacna1bO55017 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1bO55017 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1bO55017 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1bO55017 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1bO55017 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1bO55017 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Cacna1bO55017 Gm17808-201ENSMUST00000200859 894 ntBASIC17.08■□□□□ 0.33
Cacna1bO55017 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.08■□□□□ 0.32
Cacna1bO55017 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cacna1bO55017 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Cacna1bO55017 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cacna1bO55017 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.08■□□□□ 0.32
Cacna1bO55017 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.08■□□□□ 0.32
Cacna1bO55017 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cacna1bO55017 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cacna1bO55017 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1bO55017 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1bO55017 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1bO55017 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.07■□□□□ 0.32
Cacna1bO55017 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1bO55017 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
Cacna1bO55017 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1bO55017 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1bO55017 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Cacna1bO55017 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.07■□□□□ 0.32
Cacna1bO55017 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.07■□□□□ 0.32
Cacna1bO55017 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.07■□□□□ 0.32
Cacna1bO55017 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.07■□□□□ 0.32
Cacna1bO55017 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1bO55017 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1bO55017 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1bO55017 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.07■□□□□ 0.32
Cacna1bO55017 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.07■□□□□ 0.32
Cacna1bO55017 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1bO55017 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1bO55017 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1bO55017 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Cacna1bO55017 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.07■□□□□ 0.32
Cacna1bO55017 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1bO55017 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1bO55017 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cacna1bO55017 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.06■□□□□ 0.32
Cacna1bO55017 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1bO55017 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1bO55017 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cacna1bO55017 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1bO55017 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1bO55017 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1bO55017 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1bO55017 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1bO55017 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1bO55017 Golph3-202ENSMUST00000226517 2359 ntBASIC17.05■□□□□ 0.32
Cacna1bO55017 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1bO55017 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.05■□□□□ 0.32
Cacna1bO55017 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1bO55017 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cacna1bO55017 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cacna1bO55017 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms