Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Efnb3O35393 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Efnb3O35393 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Efnb3O35393 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Efnb3O35393 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Efnb3O35393 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Efnb3O35393 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Efnb3O35393 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Efnb3O35393 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Efnb3O35393 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Efnb3O35393 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Efnb3O35393 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.05□□□□□ -0.16
Efnb3O35393 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Efnb3O35393 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.05□□□□□ -0.16
Efnb3O35393 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.05□□□□□ -0.16
Efnb3O35393 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Efnb3O35393 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Efnb3O35393 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Efnb3O35393 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Efnb3O35393 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Efnb3O35393 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Efnb3O35393 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Efnb3O35393 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.05□□□□□ -0.16
Efnb3O35393 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Efnb3O35393 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Efnb3O35393 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Efnb3O35393 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Efnb3O35393 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Efnb3O35393 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Efnb3O35393 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.04□□□□□ -0.16
Efnb3O35393 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Efnb3O35393 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.04□□□□□ -0.16
Efnb3O35393 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Efnb3O35393 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Efnb3O35393 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.04□□□□□ -0.16
Efnb3O35393 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Efnb3O35393 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Efnb3O35393 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Efnb3O35393 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Efnb3O35393 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Efnb3O35393 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Efnb3O35393 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Efnb3O35393 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.04□□□□□ -0.16
Efnb3O35393 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Efnb3O35393 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.04□□□□□ -0.16
Efnb3O35393 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.04□□□□□ -0.16
Efnb3O35393 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Efnb3O35393 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Efnb3O35393 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Efnb3O35393 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Efnb3O35393 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.03□□□□□ -0.16
Efnb3O35393 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Efnb3O35393 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Efnb3O35393 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Efnb3O35393 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Efnb3O35393 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Efnb3O35393 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Efnb3O35393 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Efnb3O35393 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Efnb3O35393 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Efnb3O35393 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.03□□□□□ -0.16
Efnb3O35393 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Efnb3O35393 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Efnb3O35393 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Efnb3O35393 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.03□□□□□ -0.16
Efnb3O35393 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Efnb3O35393 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Efnb3O35393 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Efnb3O35393 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Efnb3O35393 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Efnb3O35393 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Efnb3O35393 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Efnb3O35393 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Efnb3O35393 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Efnb3O35393 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.02□□□□□ -0.16
Efnb3O35393 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Efnb3O35393 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Efnb3O35393 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Efnb3O35393 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Efnb3O35393 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Efnb3O35393 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Efnb3O35393 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.02□□□□□ -0.17
Efnb3O35393 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Efnb3O35393 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Efnb3O35393 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Efnb3O35393 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Efnb3O35393 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Efnb3O35393 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Efnb3O35393 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Efnb3O35393 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Efnb3O35393 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Efnb3O35393 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Efnb3O35393 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Efnb3O35393 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Efnb3O35393 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Efnb3O35393 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Efnb3O35393 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Efnb3O35393 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.01□□□□□ -0.17
Efnb3O35393 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Efnb3O35393 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms